RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CMTM7Q96FZ5 175 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 TECTBQ96PL2 329 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 MRPL45Q9BRJ2 306 aaKnown RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 MTG1Q9BT17 334 aaPredicted RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 SLC38A10Q9HBR0 1119 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 SUN2Q9UH99 717 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 Q9Y3F1 56 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 RPL36Q9Y3U8 105 aaKnown RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 TP53BP1Q12888 1972 aaPredicted RBP3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 NOTCH3Q9UM47 2321 aa3.52□□□□□ -1.85
PRPF38A-203ENST00000487160 NCOR2Q9Y618 2525 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 IGHV1OR21-1A0A087WYE8 117 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 A0A0J9YXY3 114 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 A6NIZ1 184 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 GOLGA8SH3BPF8 625 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 HDAC3O15379 428 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 SNAPINO95295 136 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 NDUFB10O96000 172 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 NCF2P19878 526 aaPredicted RBP3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 MX1P20591 662 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 GSSP48637 474 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 KLK7P49862 253 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 CDH4P55283 916 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 ACTR3P61158 418 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 RAP1BP61224 184 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 OGDHQ02218 1023 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 TGFBR3Q03167 851 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 IMMTQ16891 758 aaKnown RBP3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 PARP15Q460N3 678 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 C6orf226Q5I0X4 101 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 EOGTQ5NDL2 527 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 SAMD4BQ5PRF9 694 aaKnown RBP3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 C1orf146Q5VVC0 180 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 ENPP6Q6UWR7 440 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 RUFY3Q7L099 469 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 SLC22A9Q8IVM8 553 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 C11orf53Q8IXP5 236 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 RDH10Q8IZV5 341 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 C6orf223Q8N319 242 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 TMEM105Q8N8V8 129 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 C7orf33Q8WU49 177 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 DNAJA4Q8WW22 397 aaPredicted RBP3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 FMO2Q99518 471 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 SELENOIQ9C0D9 397 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 METTL7AQ9H8H3 244 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 ZDHHC11Q9H8X9 412 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 BTNL2Q9UIR0 455 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 TMCO1Q9UM00 188 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 TRAF3IP3Q9Y228 551 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 NPTNQ9Y639 398 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 ASPMQ8IZT6 3477 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 CACNA1GO43497 2377 aa3.51□□□□□ -1.85
PRPF38A-203ENST00000487160 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 ACACBO00763 2458 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 RAD50Q92878 1312 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 H0Y8G0 127 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 HCRTR1O43613 425 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 ZNF780AO75290 641 aaPredicted RBP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 ATP1B2P14415 290 aaPredicted RBP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 ETS2P15036 469 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 CXCR2P25025 360 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 SSR1P43307 286 aaKnown RBP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 GPM6AP51674 278 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 APOC4P55056 127 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 MICBQ29980 383 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 CTSL3PQ5NE16 218 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 C11orf71Q6IPW1 123 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 ZNF571Q7Z3V5 609 aaPredicted RBP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 UBE2J2Q8N2K1 259 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 ZNF740Q8NDX6 193 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 BRSK1Q8TDC3 778 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 ZNF641Q96N77 438 aaPredicted RBP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 HIST1H4GQ99525 98 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 TSG101Q99816 390 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 NAT9Q9BTE0 207 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 POLR2J2Q9GZM3 115 aaKnown RBP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 POLR2J3Q9H1A7 115 aaKnown RBP3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 PPA2Q9H2U2 334 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 OR51J1Q9H342 316 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 NARFLQ9H6Q4 476 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 AZI2Q9H6S1 392 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 SH2D2AQ9NP31 389 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 CEP250Q9BV73 2442 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 CHD8Q9HCK8 2581 aa3.5□□□□□ -1.85
PRPF38A-203ENST00000487160 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 WDFY3Q8IZQ1 3526 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 ZNF532Q9HCE3 1301 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 SPEGQ15772 3267 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 IGHV3OR16-13A0A075B7E8 117 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 NSG1A0A0A6YYJ2 146 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 FAM231BA6NCW3 169 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 C5orf67F2Z3F1 127 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 LOC110117498-PIK3R3F6TDL0 507 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 HAS3O00219 553 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 MMP23AO75900 390 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 MMP1P03956 469 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 KLK3P07288 261 aaPredicted RBP3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 ZNF19P17023 458 aa3.49□□□□□ -1.85
PRPF38A-203ENST00000487160 GABRR1P24046 479 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms