RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 F5H0A9 414 aaPredicted RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 H3BSA7 217 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 PIP5K1CO60331 668 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 SERPINI2O75830 405 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 KRT75O95678 551 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 BCHEP06276 602 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 PATE4P0C8F1 98 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 HLA-DOBP13765 273 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 RPS2P15880 293 aaKnown RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 CCNOP22674 350 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 CBLP22681 906 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 AHCYP23526 432 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 ECHS1P30084 290 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 MDH2P40926 338 aaKnown RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 NCALDP61601 193 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 SEC61A1P61619 476 aaKnown RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 GNB2P62879 340 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 TNFAIP6P98066 277 aaPredicted RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 HSF2Q03933 536 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 CASP8Q14790 479 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 NRN1LQ496H8 165 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 KPRPQ5T749 579 aaPredicted RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 C6orf89Q6UWU4 347 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 BRD3OSQ6XYD6 125 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 Q6YL49 198 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 ZER1Q7Z7L7 766 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 SERPINA11Q86U17 422 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 PAQR4Q8N4S7 273 aaPredicted RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 HIPK4Q8NE63 616 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 OR6S1Q8NH40 331 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 LINC01006Q8NI28 216 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 VANGL1Q8TAA9 524 aaPredicted RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 DNAJA4Q8WW22 397 aaPredicted RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 SSMEM1Q8WWF3 244 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 GEMIN6Q8WXD5 167 aaKnown RBP6.43□□□□□ -1.38
PDPN-205ENST00000487038 TAAR8Q969N4 342 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 PLEKHA8Q96JA3 519 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 C3orf30Q96M34 536 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 RHOXF2Q9BQY4 288 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 SPATA9Q9BWV2 254 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 KCNN2Q9H2S1 579 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 SLC6A13Q9NSD5 602 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 TMEM38BQ9NVV0 291 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 SELENONQ9NZV5 590 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 BTNL2Q9UIR0 455 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 TRIM33Q9UPN9 1127 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 IFT52Q9Y366 437 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 DNAH9Q9NYC9 4486 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 STAB2Q8WWQ8 2551 aa6.43□□□□□ -1.38
PDPN-205ENST00000487038 CCDC154A6NI56 674 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 ZSCAN5BA6NJL1 495 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 E9PBE3 544 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 MS4A18H0YCH9 400 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 MGRN1O60291 552 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 HPRP00739 348 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 MELTFP08582 738 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 PRG2P13727 222 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 KRT4P19013 534 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 CD80P33681 288 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 S100A3P33764 101 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 ZNF84P51523 738 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 BIDP55957 195 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 LOXL3P58215 753 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 PROK1P58294 105 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 KRTAP10-3P60369 221 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 BST1Q10588 318 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 MS4A18Q3C1V0 323 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 ALG10BQ5I7T1 473 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 SPANXN4Q5MJ08 99 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 SAMD5Q5TGI4 173 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 MBNL2Q5VZF2 373 aaKnown RBP6.42□□□□□ -1.38
PDPN-205ENST00000487038 GDPGP1Q6ZNW5 385 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 VASH1Q7L8A9 365 aaPredicted RBP6.42□□□□□ -1.38
PDPN-205ENST00000487038 NLRC3Q7RTR2 1065 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 PXKQ7Z7A4 578 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 LRRC28Q86X40 367 aaPredicted RBP6.42□□□□□ -1.38
PDPN-205ENST00000487038 POU5F2Q8N7G0 328 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 ZNF283Q8N7M2 679 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 BHLHE22Q8NFJ8 381 aaPredicted RBP6.42□□□□□ -1.38
PDPN-205ENST00000487038 FGFBP3Q8TAT2 258 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 RAB40AQ8WXH6 277 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 LRTOMTQ8WZ04 291 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 ZNF566Q969W8 418 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 SLC41A3Q96GZ6 507 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 MAGEB18Q96M61 343 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 CCDC115Q96NT0 180 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 ARHGDIGQ99819 225 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 SH3GL3Q99963 347 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 RASSF4Q9H2L5 321 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 PPCSQ9HAB8 311 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 THUMPD1Q9NXG2 353 aaKnown RBP6.42□□□□□ -1.38
PDPN-205ENST00000487038 GLTPQ9NZD2 209 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 KLHL14Q9P2G3 628 aa6.42□□□□□ -1.38
PDPN-205ENST00000487038 A0A0G2JPF8 293 aa6.41□□□□□ -1.38
PDPN-205ENST00000487038 CEACAM18A8MTB9 384 aa6.41□□□□□ -1.38
PDPN-205ENST00000487038 HNRNPCL2B2RXH8 293 aa6.41□□□□□ -1.38
PDPN-205ENST00000487038 HNRNPCL3B7ZW38 293 aa6.41□□□□□ -1.38
PDPN-205ENST00000487038 IFNL4K9M1U5 179 aa6.41□□□□□ -1.38
PDPN-205ENST00000487038 SURF4O15260 269 aa6.41□□□□□ -1.38
PDPN-205ENST00000487038 DHHO43323 396 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms