RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ANKRD19PQ9H560 264 aa16.9■□□□□ 0.3
SNX5-213ENST00000486039 STX18Q9P2W9 335 aaKnown RBP16.9■□□□□ 0.3
SNX5-213ENST00000486039 IGHV4-30-2A0A087WSY4 118 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 A0A1W2PRQ8 180 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 hCG_2039718K7EN88 272 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 GMNNO75496 209 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 LY6HO94772 140 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 DIRAS1O95057 198 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 FARS2O95363 451 aaKnown RBP16.89■□□□□ 0.29
SNX5-213ENST00000486039 SEMG1P04279 462 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 H1F0P07305 194 aaKnown RBP16.89■□□□□ 0.29
SNX5-213ENST00000486039 RHCEP18577 417 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 NR4A1P22736 598 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 SLC9A3P48764 834 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 EFNA4P52798 201 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 RPL27P61353 136 aaKnown RBP16.89■□□□□ 0.29
SNX5-213ENST00000486039 SNRPD2P62316 118 aaKnown RBP16.89■□□□□ 0.29
SNX5-213ENST00000486039 FMODQ06828 376 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 KRTAP1-1Q07627 177 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 SNTB2Q13425 540 aaKnown RBP16.89■□□□□ 0.29
SNX5-213ENST00000486039 DAG1Q14118 895 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 DGCR6Q14129 220 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 ANKDD1AQ495B1 522 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 NRN1LQ496H8 165 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 SAMD4BQ5PRF9 694 aaKnown RBP16.89■□□□□ 0.29
SNX5-213ENST00000486039 PODNL1Q6PEZ8 512 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 TMPRSS11FQ6ZWK6 438 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 OAFQ86UD1 273 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 CDK20Q8IZL9 346 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 FITM2Q8N6M3 262 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 ZNF525Q8N782 197 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 CLDN22Q8N7P3 220 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 SORCS2Q96PQ0 1159 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 TSPAN32Q96QS1 320 aa16.89■□□□□ 0.29
SNX5-213ENST00000486039 ANK3Q12955 4377 aaKnown RBP16.89■□□□□ 0.29
SNX5-213ENST00000486039 JMJD1CQ15652 2540 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 TMEM129A0AVI4 362 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 KIAA1324LA8MWY0 1029 aaPredicted RBP16.88■□□□□ 0.29
SNX5-213ENST00000486039 F12P00748 615 aaPredicted RBP16.88■□□□□ 0.29
SNX5-213ENST00000486039 SERPINA5P05154 406 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 ZNF26P17031 533 aaPredicted RBP16.88■□□□□ 0.29
SNX5-213ENST00000486039 NPR2P20594 1047 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 ZNF84P51523 738 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 KRT72Q14CN4 511 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 MSMPQ1L6U9 139 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 SLC25A47Q6Q0C1 308 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 DEFB107AQ8IZN7 70 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 ZNF519Q8TB69 540 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 PYURFQ96I23 114 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 DOK1Q99704 481 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 RHNO1Q9BSD3 238 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 MAGEL2Q9UJ55 1249 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 FAM32AQ9Y421 112 aaKnown RBP16.88■□□□□ 0.29
SNX5-213ENST00000486039 UGT2A1Q9Y4X1 527 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 V9GYQ6 96 aa16.88■□□□□ 0.29
SNX5-213ENST00000486039 A0A096LNT2 108 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 TRBV4-1A0A0J9YWV2 114 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 ARPC2O15144 300 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 GPRIN2O60269 458 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 ENTPD5O75356 428 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 CDAP32320 146 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 CD47Q08722 323 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 SEC23BQ15437 767 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 ZBED5Q49AG3 693 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 CLEC2AQ6UVW9 174 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 C16orf89Q6UX73 402 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 RRM2BQ7LG56 351 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 SLC16A14Q7RTX9 510 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 SVOPLQ8N434 492 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 LRRC18Q8N456 261 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 NSMAFQ92636 917 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 NABP1Q96AH0 204 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 FAM46AQ96IP4 442 aaKnown RBP16.87■□□□□ 0.29
SNX5-213ENST00000486039 DHRS1Q96LJ7 313 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 ALG12Q9BV10 488 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 SMURF2Q9HAU4 748 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 FBXL3Q9UKT7 428 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 ARFGEF3Q5TH69 2177 aa16.87■□□□□ 0.29
SNX5-213ENST00000486039 VSTM5A8MXK1 200 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 OMPP47874 163 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 LIMS1P48059 325 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 DSCR9P59020 149 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 MRPS34P82930 218 aaKnown RBP16.86■□□□□ 0.29
SNX5-213ENST00000486039 MXRA7P84157 204 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 SLC36A2Q495M3 483 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 FGD3Q5JSP0 725 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 DPPA2Q7Z7J5 298 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 NSMCE2Q96MF7 247 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 VRK1Q99986 396 aaPredicted RBP16.86■□□□□ 0.29
SNX5-213ENST00000486039 FUZQ9BT04 418 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 RNF121Q9H920 327 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 SIAEQ9HAT2 523 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 NDE1Q9NXR1 346 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 TMEM5Q9Y2B1 443 aa16.86■□□□□ 0.29
SNX5-213ENST00000486039 PTP4A3O75365 173 aa16.85■□□□□ 0.29
SNX5-213ENST00000486039 FAM107AO95990 144 aa16.85■□□□□ 0.29
SNX5-213ENST00000486039 IGFBP1P08833 259 aaPredicted RBP16.85■□□□□ 0.29
SNX5-213ENST00000486039 MMP7P09237 267 aaPredicted RBP16.85■□□□□ 0.29
SNX5-213ENST00000486039 GLRXP35754 106 aa16.85■□□□□ 0.29
SNX5-213ENST00000486039 PPOXP50336 477 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms