RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 VPS35Q96QK1 796 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 CCL19Q99731 98 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TSG101Q99816 390 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 UTP23Q9BRU9 249 aaKnown RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 LRTM1Q9HBL6 345 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TIGARQ9NQ88 270 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 SPRR3Q9UBC9 169 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TRPC4Q9UBN4 977 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF282Q9UDV7 671 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TEKT2Q9UIF3 430 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 TENM3Q9P273 2699 aa3.13□□□□□ -1.91
SMARCC1-207ENST00000485833 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 SH3PXD2BA1X283 911 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 USP27XA6NNY8 438 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CCL22O00626 93 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 LSM8O95777 96 aaKnown RBP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 HEXBP07686 556 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CT45A8P0DMV1 189 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CT45A9P0DMV2 189 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 VCLP18206 1134 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 MIPP30301 263 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 HSPA9P38646 679 aaKnown RBP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 SYKP43405 635 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 KLK7P49862 253 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 LRRC63Q05C16 580 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC10A1Q14973 349 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 HKDC1Q2TB90 917 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 FBXL19-AS1Q494R0 122 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CT45A2Q5DJT8 189 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 C6orf52Q5T4I8 152 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 C1orf185Q5T7R7 199 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 DDI2Q5TDH0 399 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF658Q5TYW1 1059 aaPredicted RBP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 DMKNQ6E0U4 476 aaPredicted RBP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 HOOK3Q86VS8 718 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 LAX1Q8IWV1 398 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 GPR137CQ8N3F9 429 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 ATPAF2Q8N5M1 289 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 ZFP62Q8NB50 900 aaPredicted RBP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 NELFBQ8WX92 580 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 TSLPQ969D9 159 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 RAB3CQ96E17 227 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CSPG4P5Q96PW8 444 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 PANX3Q96QZ0 392 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 TUBGCP2Q9BSJ2 902 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 REG4Q9BYZ8 158 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 POLR1EQ9GZS1 481 aaKnown RBP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CHRNA10Q9GZZ6 450 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 IKZF5Q9H5V7 419 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 COG4Q9H9E3 785 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC25A19Q9HC21 320 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 RBM22Q9NW64 420 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 DNAJB9Q9UBS3 223 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 NXT1Q9UKK6 140 aaKnown RBP3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 ALG6Q9Y672 507 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CADP27708 2225 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 NINQ8N4C6 2090 aa3.12□□□□□ -1.91
SMARCC1-207ENST00000485833 CMYA5Q8N3K9 4069 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 A0A0A6YYC8 382 aaPredicted RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 A0A0J9YVX5 310 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 RGSL1A5PLK6 1076 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 FRG2CA6NGY1 282 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 SIGLEC16A6NMB1 481 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 F8VZ95 297 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 I3L1I5 382 aaPredicted RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 KCNK1O00180 336 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 TSPAN2O60636 221 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 CRCPO75575 148 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 DUSP14O95147 198 aaKnown RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 GOT2P00505 430 aaKnown RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 IGHV3-9P01782 118 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 SBK2P0C263 348 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 CMA1P23946 247 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 IGFBP5P24593 272 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ACVR1BP36896 505 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 MAGEA5P43359 124 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 PRLHRP49683 370 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ATP5J2P56134 94 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 GBE1Q04446 702 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 GRB7Q14451 532 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 EXOC3L4Q17RC7 722 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 CLEC12BQ2HXU8 276 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 BCL7AQ4VC05 210 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 RIPPLY2Q5TAB7 128 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 NCBP2-AS2Q69YL0 99 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 PDPK2PQ6A1A2 396 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ABHD13Q7L211 337 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ANKRD37Q7Z713 158 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 SLC13A5Q86YT5 568 aaPredicted RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 TMEM251Q8N6I4 163 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 PIK3IP1Q96FE7 263 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ZNF396Q96N95 335 aaPredicted RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 SPAG8Q99932 426 aaPredicted RBP3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 C19orf43Q9BQ61 176 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 SELENOSQ9BQE4 189 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 CNPY3Q9BT09 278 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 TTTY12Q9BZ98 90 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 FAM96AQ9H5X1 160 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 ZDHHC11Q9H8X9 412 aa3.11□□□□□ -1.91
SMARCC1-207ENST00000485833 LIN28AQ9H9Z2 209 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms