RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CKAP5Q14008 2032 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TRBV6-7A0A0A0MS04 114 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 A0A0A6YYH2 397 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 KANTRA0A1W2PQU2 76 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM218A2RU14 115 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 OR6C68A6NDL8 312 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 A6NJ64 397 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM200CA6NKL6 621 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM212A6NML5 194 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 OR4C45A6NMZ5 311 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 EFCAB7A8K855 629 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 FAM25EA8MYX2 175 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 MCIDASD6RGH6 385 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 C1QTNF3-AMACRE9PGA6 284 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 F8VVB4 439 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 F8VWA3 439 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 NPIPB9F8W1W9 429 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 H7C2Y5 167 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 SULT2B1O00204 365 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 PEX12O00623 359 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 IMPA2O14732 288 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 MAGEB4O15481 346 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 NUPL2O15504 423 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 P2RX6O15547 441 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 DOK2O60496 412 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 CDC40O60508 579 aaKnown RBP eCLIP4.24□□□□□ -1.733e-6■■■□□ 17.2
SMARCC1-206ENST00000485737 RAD1O60671 282 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 KDM4BO94953 1096 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 SPDEFO95238 335 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 KAT7O95251 611 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TXNDC12O95881 172 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 APOC1P02654 83 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 CD74P04233 296 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 RLN1P04808 185 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ANXA2P07355 339 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 NGFRP08138 427 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 POU2F2P09086 479 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF888P0CJ79 500 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TMIGD3P0DMS9 266 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 FOLR2P14207 255 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 CSF2RAP15509 400 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 CEBPBP17676 345 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 PTNP21246 168 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ITPKBP27987 946 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 PSMB10P40306 273 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ACAA2P42765 397 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 RAB13P51153 203 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 GPR143P51810 404 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 PSMD4P55036 377 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 CLDN12P56749 244 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TAS2R19P59542 299 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 DMWDQ09019 674 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 RASGEF1BQ0VAM2 473 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 MGAT2Q10469 447 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ALKBH1Q13686 389 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 SNTB1Q13884 538 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 MELKQ14680 651 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 DHCR24Q15392 516 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TSC22D1Q15714 1073 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 GPR68Q15743 365 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 STK11Q15831 433 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 PNLIPRP3Q17RR3 467 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF528Q3MIS6 628 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ANKRD39Q53RE8 183 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 PAN3Q58A45 887 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ALG10BQ5I7T1 473 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 LIPNQ5VXI9 398 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 GLT8D1Q68CQ7 371 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 FAM166AQ6J272 317 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 STEAP1BQ6NZ63 245 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 C3orf33Q6P1S2 294 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ULK3Q6PHR2 472 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 C11orf88Q6PI97 169 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF813Q6ZN06 617 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 MTSS1LQ765P7 747 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 NDUFAF7Q7L592 441 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF550Q7Z398 422 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 TMPRSS12Q86WS5 348 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 CDC20BQ86Y33 519 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 C1QL4Q86Z23 238 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 SERPINA12Q8IW75 414 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 SKA3Q8IX90 412 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 PUSL1Q8N0Z8 303 aaKnown RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 GABRG1Q8N1C3 465 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 C12orf45Q8N5I9 185 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF433Q8N7K0 673 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 COX18Q8N8Q8 333 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 RELL2Q8NC24 303 aaPredicted RBP4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 KREMEN2Q8NCW0 462 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 STEAP2Q8NFT2 490 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 OR1M1Q8NGA1 313 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 OR4K13Q8NH42 304 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 HMGB4Q8WW32 186 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNRF4Q8WWF5 429 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 LIPHQ8WWY8 451 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 OIT3Q8WWZ8 545 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 RSC1A1Q92681 617 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 FGF13Q92913 245 aa4.24□□□□□ -1.73
SMARCC1-206ENST00000485737 MCHR2Q969V1 340 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms