RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 HSF2Q03933 536 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 RIN1Q13671 783 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 MAPRE2Q15555 327 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 FXNQ16595 210 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 ALKBH6Q3KRA9 238 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 NANOGP8Q6NSW7 305 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 ERICH5Q6P6B1 374 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 TMEM154Q6P9G4 183 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 RINLQ6ZS11 566 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 WDFY1Q8IWB7 410 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 LRRC18Q8N456 261 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 NOXO1Q8NFA2 376 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 OR4K5Q8NGD3 323 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 OR4D11Q8NGI4 311 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 C11orf40Q8WZ69 217 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 SGTBQ96EQ0 304 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 C1orf159Q96HA4 380 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 ZNF416Q9BWM5 594 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 POLR2J2Q9GZM3 115 aaKnown RBP11.38□□□□□ -0.59
UBA3-210ENST00000485424 PCDHAC1Q9H158 963 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 POLR2J3Q9H1A7 115 aaKnown RBP11.38□□□□□ -0.59
UBA3-210ENST00000485424 ZNF385DQ9H6B1 395 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 NANOGQ9H9S0 305 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 INIPQ9NRY2 104 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 TAAR3PQ9P1P4 343 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 DOCK11Q5JSL3 2073 aa11.38□□□□□ -0.59
UBA3-210ENST00000485424 MEGF8Q7Z7M0 2845 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
UBA3-210ENST00000485424 TCF21O43680 179 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 OR7A10O76100 309 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 FUT1P19526 365 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 CCNOP22674 350 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 RBM34P42696 430 aaKnown RBP11.37□□□□□ -0.59
UBA3-210ENST00000485424 DVL1P1P54792 670 aaPredicted RBP11.37□□□□□ -0.59
UBA3-210ENST00000485424 TEKQ02763 1124 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 RPL18Q07020 188 aaKnown RBP11.37□□□□□ -0.59
UBA3-210ENST00000485424 CD47Q08722 323 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 MOGQ16653 247 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 SHQ1Q6PI26 577 aaKnown RBP11.37□□□□□ -0.59
UBA3-210ENST00000485424 UNQ6126/PRO20091Q6UXV3 157 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 NHLRC1Q6VVB1 395 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 CCDC80Q76M96 950 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 LRP11Q86VZ4 500 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 RFLNBQ8N5W9 214 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 SYT14Q8NB59 555 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 SYNPRQ8TBG9 265 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 TMEM239Q8WW34 195 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 MCHR2Q969V1 340 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 LRRC58Q96CX6 371 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 VIPAS39Q9H9C1 493 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 GID8Q9NWU2 228 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 SLCO1C1Q9NYB5 712 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 MED31Q9Y3C7 131 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 GRIP1Q9Y3R0 1128 aa11.37□□□□□ -0.59
UBA3-210ENST00000485424 GMNCA6NCL1 334 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 BBIP1A8MTZ0 92 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 CENPBD1B2RD01 187 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 MRASO14807 208 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 MGRN1O60291 552 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 SHOX2O60902 331 aaPredicted RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 LYPD3O95274 346 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 NPPAP01160 153 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 TFP02787 698 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 HPXP02790 462 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 THY1P04216 161 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 IGFBP1P08833 259 aaPredicted RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 CCL2P13500 99 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 ACADSP16219 412 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 ITGA2P17301 1181 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 COL8A2P25067 703 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 GUCA1AP43080 201 aaPredicted RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 SCGB2A2Q13296 93 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 MSMPQ1L6U9 139 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 NRN1LQ496H8 165 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 LRRC23Q53EV4 343 aaPredicted RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 ELFN2Q5R3F8 820 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 LRFN4Q6PJG9 635 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 ZNF584Q8IVC4 421 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 PCYOX1LQ8NBM8 494 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 OR8J3Q8NGG0 315 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 PFN4Q8NHR9 129 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 CLDND2Q8NHS1 167 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 FGFBP3Q8TAT2 258 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 TMEM255BQ8WV15 326 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 ASB10Q8WXI3 467 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 TPD52L3Q96J77 140 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 ZNF426Q9BUY5 554 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 MEPEQ9NQ76 525 aaPredicted RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 ZNF275Q9NSD4 429 aaPredicted RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 DECR2Q9NUI1 292 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 MYEF2Q9P2K5 600 aaKnown RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 EIF3KQ9UBQ5 218 aaKnown RBP11.36□□□□□ -0.59
UBA3-210ENST00000485424 RIMS3Q9UJD0 308 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 MGAM2Q2M2H8 2515 aa11.36□□□□□ -0.59
UBA3-210ENST00000485424 FBP2O00757 339 aa11.35□□□□□ -0.59
UBA3-210ENST00000485424 TRMUO75648 421 aaKnown RBP11.35□□□□□ -0.59
UBA3-210ENST00000485424 OR5F1O95221 314 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms