RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	COL6A5	A8TX70	2615 aa		2.93	□□□□□ -1.94
VPS8-223	ENST00000485024	NFAT5	O94916	1531 aa		2.93	□□□□□ -1.94
VPS8-223	ENST00000485024	SHROOM3	Q8TF72	1996 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	NBEAL2	Q6ZNJ1	2754 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	PHIP	Q8WWQ0	1821 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024		A0A1W2PPE3	182 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	LRRIQ4	A6NIV6	560 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	OR5B21	A6NL26	309 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	CASQ2	O14958	399 aa	Predicted RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	SOX15	O60248	233 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	SNAPIN	O95295	136 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	LGI1	O95970	557 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	KRT6A	P02538	564 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	KLK3	P07288	261 aa	Predicted RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	TBP	P20226	339 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	DDOST	P39656	456 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	SYK	P43405	635 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	KIR2DS4	P43632	304 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	YAP1	P46937	504 aa	Known RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	GPM6A	P51674	278 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	KPNA2	P52292	529 aa	Known RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	PLP1	P60201	277 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	ERVK-25	P63136	954 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	KIAA0040	Q15053	153 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	ZNF77	Q15935	545 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	DGUOK	Q16854	277 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	XKR7	Q5GH72	579 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	KLF17	Q5JT82	389 aa	Predicted RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	UTF1	Q5T230	341 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	OR52E8	Q6IFG1	317 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	CGB2	Q6NT52	195 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	CCDC73	Q6ZRK6	1079 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	BZW1	Q7L1Q6	419 aa	Known RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	VRK2	Q86Y07	508 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	KLHL30-AS1	Q8NEE0	82 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	OR52H1	Q8NGJ2	320 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	OR56B4	Q8NH76	319 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	FAM81A	Q8TBF8	368 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	GPR151	Q8TDV0	419 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	PAQR8	Q8TEZ7	354 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	TSEN15	Q8WW01	171 aa	Known RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	SLC38A4	Q969I6	547 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	TM4SF19	Q96DZ7	209 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	ZNF578	Q96N58	590 aa	Predicted RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	FOXN4	Q96NZ1	517 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	SUDS3	Q9H7L9	328 aa	Predicted RBP	2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	PLGRKT	Q9HBL7	147 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	ABCD2	Q9UBJ2	740 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	PHLPP2	Q6ZVD8	1323 aa		2.92	□□□□□ -1.94
VPS8-223	ENST00000485024	BOD1L1	Q8NFC6	3051 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	SVIL	O95425	2214 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	IGHV1OR21-1	A0A087WYE8	117 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	DCTN6	O00399	190 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	CDX4	O14627	284 aa	Predicted RBP	2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	BCL2L11	O43521	198 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	RNF13	O43567	381 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	PSTPIP1	O43586	416 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	HCRTR1	O43613	425 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	KLHL41	O60662	606 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	ERLIN2	O94905	339 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	TMEM50A	O95807	157 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	MMP1	P03956	469 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	THY1	P04216	161 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	C2	P06681	752 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	OR8U8	P0C7N1	319 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	ZNF806	P0C7X5	589 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	CCDC166	P0CW27	439 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	ZNF24	P17028	368 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	EIF2S2	P20042	333 aa	Known RBP	2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	IL2RG	P31785	369 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	SHMT2	P34897	504 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	FDFT1	P37268	417 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	VHL	P40337	213 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	GLP1R	P43220	463 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	BTD	P43251	543 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	C21orf59	P57076	290 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	RGS8	P57771	180 aa	Predicted RBP	2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	KCNJ2	P63252	427 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	IL18	Q14116	193 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	GRB7	Q14451	532 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	ARHGAP19	Q14CB8	494 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	TGFBI	Q15582	683 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	VPS26B	Q4G0F5	336 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	MARCH8	Q5T0T0	291 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	CXCL17	Q6UXB2	119 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	PAMR1	Q6UXH9	720 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	SPNS3	Q6ZMD2	512 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	CDC20B	Q86Y33	519 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	ZNF100	Q8IYN0	542 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	CATSPER1	Q8NEC5	780 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	OR7G2	Q8NG99	324 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	SLC22A8	Q8TCC7	542 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	PYROXD1	Q8WU10	500 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	GTSF1	Q8WW33	167 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	PIBF1	Q8WXW3	757 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	OR1E3	Q8WZA6	343 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	PLEKHA8	Q96JA3	519 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	PGLYRP4	Q96LB8	373 aa		2.91	□□□□□ -1.94
VPS8-223	ENST00000485024	RANBP9	Q96S59	729 aa		2.91	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms