RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 C11orf98E9PRG8 122 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 F5H0A9 414 aaPredicted RBP9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 PLPP3O14495 311 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 HNRNPCL1O60812 293 aaKnown RBP9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 NGFP01138 241 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 BPGMP07738 259 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 ALDOCP09972 364 aaKnown RBP9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 NUDT7P0C024 238 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 HNRNPCL4P0DMR1 293 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 SELEP16581 610 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 AHCYP23526 432 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 WNT5AP41221 380 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 PAX2Q02962 417 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 ZMYND11Q15326 602 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 GTDC1Q4AE62 458 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 BRD3OSQ6XYD6 125 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 PXKQ7Z7A4 578 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 KLHL36Q8N4N3 616 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 CPEB3Q8NE35 698 aaKnown RBP9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 MNS1Q8NEH6 495 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 SLC25A40Q8TBP6 338 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 UBLCP1Q8WVY7 318 aaPredicted RBP9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 VPS33AQ96AX1 596 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 UPRTQ96BW1 309 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 MARS2Q96GW9 593 aaKnown RBP9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 C16orf45Q96MC5 204 aaPredicted RBP9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 DIRC2Q96SL1 478 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 CHIAQ9BZP6 476 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 C20orf27Q9GZN8 174 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 C1orf198Q9H425 327 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 ARMC7Q9H6L4 198 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 MSL2Q9HCI7 577 aa9.13□□□□□ -0.95
SMARCC1-205ENST00000483847 IQCMA0A1B0GVH7 501 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 TLDC2A0PJX2 215 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 SRRM5B3KS81 715 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 RFXANKO14593 260 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 DHHO43323 396 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 NDUFA7O95182 113 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 FARS2O95363 451 aaKnown RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 PRB2P02812 416 aaPredicted RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 ADH4P08319 380 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 MMP7P09237 267 aaPredicted RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 LBPP18428 481 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 CCNOP22674 350 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 MELKQ14680 651 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 TAF9Q16594 264 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 ZNF718Q3SXZ3 478 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 SLC36A2Q495M3 483 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 TMEM155Q4W5P6 130 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 ULK3Q6PHR2 472 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 Q6ZPA2 131 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 SLC35D2Q76EJ3 337 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 SLC16A14Q7RTX9 510 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 LRRC28Q86X40 367 aaPredicted RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 SPICQ8N5J4 248 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 C10orf53Q8N6V4 93 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 POU5F2Q8N7G0 328 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 RBM15BQ8NDT2 890 aaKnown RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 OR10S1Q8NGN2 331 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 OR1J2Q8NGS2 313 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 OR6S1Q8NH40 331 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 OR6X1Q8NH79 312 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 KLF14Q8TD94 323 aaPredicted RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 DNAJA4Q8WW22 397 aaPredicted RBP9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 MAL2Q969L2 176 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 SLC35B4Q969S0 331 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 ARHGDIGQ99819 225 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 RHOXF2Q9BQY4 288 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 NUF2Q9BZD4 464 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 OR2J1Q9GZK6 312 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 LRMDAQ9H2I8 198 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 PRDM13Q9H4Q3 707 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 TMEM106BQ9NUM4 274 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 OR5V1Q9UGF6 321 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 KLHL21Q9UJP4 597 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 IFT52Q9Y366 437 aa9.12□□□□□ -0.95
SMARCC1-205ENST00000483847 LOC100509620A0A075B734 347 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 G3V4G9 280 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 TPST1O60507 370 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 PTHP01270 115 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 CRYBA1P05813 215 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 CD55P08174 381 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 QDPRP09417 244 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 PGA4P0DJD7 388 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 PGA3P0DJD8 388 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 ADORA3P0DMS8 318 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 THRBP10828 461 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 APLNRP35414 380 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 BTG1P62324 171 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 TNFAIP6P98066 277 aaPredicted RBP9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 PLP2Q04941 152 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 BEAN1Q3B7T3 259 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 ESCO2Q56NI9 601 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 PABPC1L2AQ5JQF8 200 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 RFPL4BQ6ZWI9 263 aa9.11□□□□□ -0.95
SMARCC1-205ENST00000483847 LRRC18Q8N456 261 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms