RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 BST1Q10588 318 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 MPP2Q14168 576 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 OR1Q1Q15612 314 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 MOGQ16653 247 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 MIDNQ504T8 468 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 FAM91A1Q658Y4 838 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 NXNQ6DKJ4 435 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM53Q6P2H8 277 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 ARL6IP6Q8N6S5 226 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 BBS10Q8TAM1 723 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM54Q969K7 222 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 LRRC58Q96CX6 371 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 GAL3ST1Q99999 423 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 RMND5AQ9H871 391 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 UNKLQ9H9P5 680 aaKnown RBP6.27□□□□□ -1.41
CSDE1-206ENST00000483030 SAP30LQ9HAJ7 183 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM27Q9HBJ8 222 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 A4GALTQ9NPC4 353 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM38BQ9NVV0 291 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 UBAP1Q9NZ09 502 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 GLTPQ9NZD2 209 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF69Q9UC07 566 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 BLOC1S6Q9UL45 172 aa6.27□□□□□ -1.41
CSDE1-206ENST00000483030 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 A0A0B4J2E0 115 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 A0A1B0GX12 115 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ISPDA4D126 451 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 DNAJC9-AS1A6NH13 148 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TRPC5OSA6NMA1 111 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TM9SF1O15321 606 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 HDAC3O15379 428 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 DHHO43323 396 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TPST2O60704 377 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ENTPD5O75356 428 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 FARS2O95363 451 aaKnown RBP6.26□□□□□ -1.41
CSDE1-206ENST00000483030 PTHP01270 115 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 IGHV1-46P01743 117 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 IGHV3-13P01766 116 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 MT-ND5P03915 603 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 QDPRP09417 244 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 KITP10721 976 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 BMP2P12643 396 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 IDO1P14902 403 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF81P51508 661 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 POLR2JP52435 117 aaKnown RBP6.26□□□□□ -1.41
CSDE1-206ENST00000483030 CDH12P55289 794 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 NCALDP61601 193 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 BAMBIQ13145 260 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 FADDQ13158 208 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 KRT72Q14CN4 511 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TAF11Q15544 211 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TBC1D28Q2M2D7 210 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 SLC36A2Q495M3 483 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 CEP85LQ5SZL2 805 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 DHRS4L2Q6PKH6 230 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 SLC35D2Q76EJ3 337 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 DOK3Q7L591 496 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 SLC16A14Q7RTX9 510 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ALDH16A1Q8IZ83 802 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 BCL6BQ8N143 479 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-206ENST00000483030 OR4K5Q8NGD3 323 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 OR9I1Q8NGQ6 314 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 OR1J2Q8NGS2 313 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 OR1J1Q8NGS3 322 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 OR5J2Q8NH18 312 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 OR6X1Q8NH79 312 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 NFKBIDQ8NI38 313 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ST7LQ8TDW4 575 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TAF15Q92804 592 aaKnown RBP eCLIP6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF566Q969W8 418 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ELMOD3Q96FG2 381 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 SLC25A44Q96H78 314 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-206ENST00000483030 GPA33Q99795 319 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 WFDC6Q9BQY6 131 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM109Q9BVC6 243 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 BCL2L14Q9BZR8 327 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 PAIP1Q9H074 479 aaKnown RBP6.26□□□□□ -1.41
CSDE1-206ENST00000483030 LRMDAQ9H2I8 198 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 RAD21L1Q9H4I0 556 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 KCNK9Q9NPC2 374 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TCF7L2Q9NQB0 619 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 MMP26Q9NRE1 261 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 ZIM2Q9NZV7 527 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 LEF1Q9UJU2 399 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-206ENST00000483030 NUP50Q9UKX7 468 aa6.26□□□□□ -1.41
CSDE1-206ENST00000483030 TGP01266 2768 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 IQCMA0A1B0GVH7 501 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 RGS16O15492 202 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 RNF13O43567 381 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 FOXH1O75593 365 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 UBOX5O94941 541 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 MFN2O95140 757 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SNAP29O95721 258 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 MT-ATP6P00846 226 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 SBK2P0C263 348 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 CCNOP22674 350 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 GCH1P30793 250 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 ATP4BP51164 291 aa6.25□□□□□ -1.41
CSDE1-206ENST00000483030 RGS8P57771 180 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-206ENST00000483030 VSNL1P62760 191 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms