RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ARL6IP5O75915 188 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 OR7A10O76100 309 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 DIRAS3O95661 229 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 WNT1P04628 370 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 CYC1P08574 325 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 SBK2P0C263 348 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 TRAPPC2P0DI81 140 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 TRAPPC2BP0DI82 140 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 CELP19835 753 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 SLC2A5P22732 501 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 AHCYP23526 432 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 MYL9P24844 172 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 RPS5P46782 204 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 PITPNBP48739 271 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 PSMD7P51665 324 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 RPS7P62081 194 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 PPP1CAP62136 330 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 RPS25P62851 125 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 CRYZQ08257 329 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 HNRNPA0Q13151 305 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 ASAH1Q13510 395 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 UBXN2BQ14CS0 331 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 HSPB2Q16082 182 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 CLPPQ16740 277 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 DEFB110Q30KQ9 67 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 GLYR1Q49A26 553 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 SOWAHCQ53LP3 525 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 RIPPLY2Q5TAB7 128 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 OR2G6Q5TZ20 316 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 ZNF544Q6NX49 715 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 PAQR6Q6TCH4 344 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 FAM131AQ6UXB0 335 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 BAIAP2L2Q6UXY1 529 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 WDR88Q6ZMY6 472 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 TRILQ7L0X0 811 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 MISPQ8IVT2 679 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 BCL6BQ8N143 479 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 D2HGDHQ8N465 521 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 NUDT10Q8NFP7 164 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 OR4F15Q8NGB8 312 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 OR13C2Q8NGS9 318 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 OR5W2Q8NH69 310 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 PFN4Q8NHR9 129 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 GRHL3Q8TE85 626 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 SPRYD4Q8WW59 207 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 RAB40AQ8WXH6 277 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 CLDN23Q96B33 292 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 NUDT11Q96G61 164 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 SENP5Q96HI0 755 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 DIRAS2Q96HU8 199 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 LCORQ96JN0 433 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 FAM210AQ96ND0 272 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 TGM7Q96PF1 710 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 CNN2Q99439 309 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 ZNF649Q9BS31 505 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 TTYH2Q9BSA4 534 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 MRI1Q9BV20 369 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 BARHL1Q9BZE3 327 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 LAT2Q9GZY6 243 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 SLC22A4Q9H015 551 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 RNF167Q9H6Y7 350 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 CRLF2Q9HC73 371 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 MOV10Q9HCE1 1003 aaKnown RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 MEPEQ9NQ76 525 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 TMEM74BQ9NUR3 256 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 FLRT3Q9NZU0 649 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 COPS7AQ9UBW8 275 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 PLEKHB1Q9UF11 243 aaPredicted RBP6.96□□□□□ -1.3
SNX13-208ENST00000482558 CHRNA9Q9UGM1 479 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 ERVK-19Q9WJR5 959 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 CARD8Q9Y2G2 431 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 NTNG1Q9Y2I2 539 aa6.96□□□□□ -1.3
SNX13-208ENST00000482558 IGHV1OR21-1A0A087WYE8 117 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 IGKV3D-11A0A0A0MRZ8 115 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 TRAV1-2A0A0B4J238 106 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 IGHV5-51A0A0C4DH38 117 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 CENPVL1A0A0U1RR11 272 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 CCDC182A6NF36 153 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 L7N2F9 121 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 SOCS6O14544 535 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 PHYHO14832 338 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 YKT6O15498 198 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 ZNF264O43296 627 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 CDC40O60508 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
SNX13-208ENST00000482558 TRIM3O75382 744 aaPredicted RBP6.95□□□□□ -1.3
SNX13-208ENST00000482558 AKR7A3O95154 331 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 HLA-DQB1P01920 261 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 TACSTD2P09758 323 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 FUT1P19526 365 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 FBLP22087 321 aaKnown RBP6.95□□□□□ -1.3
SNX13-208ENST00000482558 HOXA6P31267 233 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 TALDO1P37837 337 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 RFX3P48380 749 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 ARRB1P49407 418 aaPredicted RBP6.95□□□□□ -1.3
SNX13-208ENST00000482558 MEOX1P50221 254 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 BLVRAP53004 296 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 SLC25A1P53007 311 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 SLC37A1P57057 533 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 FXYD6P3P58550 94 aa6.95□□□□□ -1.3
SNX13-208ENST00000482558 RPS4XP62701 263 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms