RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 SLC35F1Q5T1Q4 408 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 GPR139Q6DWJ6 353 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 ADAM5Q6NVV9 412 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 KLHL17Q6TDP4 642 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 ZNF704Q6ZNC4 412 aaPredicted RBP17.76■□□□□ 0.43
CTSA-206ENST00000480961 PTCHD4Q6ZW05 846 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 MDP1Q86V88 176 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 SKA3Q8IX90 412 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 SLC22A24Q8N4F4 322 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 FGFBP3Q8TAT2 258 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 NEUROG1Q92886 237 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 FOXN4Q96NZ1 517 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 RERGLQ9H628 205 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 DENND2DQ9H6A0 471 aaPredicted RBP17.76■□□□□ 0.43
CTSA-206ENST00000480961 NOX3Q9HBY0 568 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 PDZD2O15018 2839 aa17.76■□□□□ 0.43
CTSA-206ENST00000480961 SPG11Q96JI7 2443 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 ABCD4O14678 606 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 GOSR1O95249 250 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 TXNDC12O95881 172 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 TP53P04637 393 aaPredicted RBP17.75■□□□□ 0.43
CTSA-206ENST00000480961 FASP25445 335 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 CD40P25942 277 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 ZNF133P52736 654 aaPredicted RBP17.75■□□□□ 0.43
CTSA-206ENST00000480961 GK3PQ14409 553 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 ETFDHQ16134 617 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 SGCAQ16586 387 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 C10orf128Q5T292 105 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 SHQ1Q6PI26 577 aaKnown RBP17.75■□□□□ 0.43
CTSA-206ENST00000480961 TMEM108Q6UXF1 575 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 ZNF627Q7L945 461 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 YTHDF3Q7Z739 585 aaKnown RBP17.75■□□□□ 0.43
CTSA-206ENST00000480961 PIAS4Q8N2W9 510 aaPredicted RBP17.75■□□□□ 0.43
CTSA-206ENST00000480961 KBTBD8Q8NFY9 601 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 OR4K13Q8NH42 304 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 RAB3IPQ96QF0 476 aaPredicted RBP17.75■□□□□ 0.43
CTSA-206ENST00000480961 TSSK6Q9BXA6 273 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 SEC61A2Q9H9S3 476 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 UBTD1Q9HAC8 227 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 OBP2BQ9NPH6 170 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 TBC1D23Q9NUY8 699 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 RNF115Q9Y4L5 304 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 MAST4O15021 2626 aa17.75■□□□□ 0.43
CTSA-206ENST00000480961 IGHV1-18A0A0C4DH31 117 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 ANKRD65E5RJM6 399 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 CELA3BP08861 270 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 HOXB1P14653 301 aaPredicted RBP17.74■□□□□ 0.43
CTSA-206ENST00000480961 HIST1H1CP16403 213 aaKnown RBP17.74■□□□□ 0.43
CTSA-206ENST00000480961 GSTM3P21266 225 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 GABPB1Q06547 395 aaPredicted RBP17.74■□□□□ 0.43
CTSA-206ENST00000480961 OTPQ5XKR4 325 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 SSX8Q7RTT4 187 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 MYPOPQ86VE0 399 aaPredicted RBP17.74■□□□□ 0.43
CTSA-206ENST00000480961 LRRC18Q8N456 261 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 ATG16L2Q8NAA4 619 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 OR52L1Q8NGH7 329 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 NMNAT3Q96T66 252 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 TMEM204Q9BSN7 226 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 SYT4Q9H2B2 425 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 SEMA6AQ9H2E6 1030 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 B3GNT2Q9NY97 397 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 IL20Q9NYY1 176 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 ZNF224Q9NZL3 707 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 REV1Q9UBZ9 1251 aa17.74■□□□□ 0.43
CTSA-206ENST00000480961 A0A1W2PPL8 197 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 ARRDC5A6NEK1 342 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 SLC16A7O60669 478 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 OR8G3PP0DMU2 310 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 APEHP13798 732 aaKnown RBP17.73■□□□□ 0.43
CTSA-206ENST00000480961 CTLA4P16410 223 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 POU1F1P28069 291 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 NOS3P29474 1203 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 IDH3GP51553 393 aaPredicted RBP17.73■□□□□ 0.43
CTSA-206ENST00000480961 ARHGDIAP52565 204 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 NPRL3Q12980 569 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 LEG1Q6P5S2 330 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 OR4Q3Q8NH05 313 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 LILRB1Q8NHL6 650 aaPredicted RBP17.73■□□□□ 0.43
CTSA-206ENST00000480961 AKAP1Q92667 903 aaKnown RBP eCLIP17.73■□□□□ 0.43
CTSA-206ENST00000480961 TSSK2Q96PF2 358 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 SMURF2Q9HAU4 748 aa17.73■□□□□ 0.43
CTSA-206ENST00000480961 AKAP9Q99996 3911 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 H3BN98 237 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 H3BNX3 289 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 BHLHE40O14503 412 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 ARPC3O15145 178 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 ENTPD5O75356 428 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 SCG5P05408 212 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 NR2C1P13056 603 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 CBR1P16152 277 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 PTAFRP25105 342 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 GIPRP48546 466 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 PTDSS1P48651 473 aaKnown RBP17.72■□□□□ 0.43
CTSA-206ENST00000480961 COX10Q12887 443 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 ZSCAN26Q16670 478 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 SLC36A3Q495N2 470 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 RPL13AP3Q6NVV1 102 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 CD300LDQ6UXZ3 194 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 ADCK1Q86TW2 530 aa17.72■□□□□ 0.43
CTSA-206ENST00000480961 JAZF1Q86VZ6 243 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms