RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SGTBQ96EQ0 304 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 SH3GL1Q99961 368 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 TAAR3PQ9P1P4 343 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 BAG5Q9UL15 447 aa13.08□□□□□ -0.32
LIMS3-203ENST00000480744 SLC22A23A1A5C7 686 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 NCR1O76036 304 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 OR7A10O76100 309 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 CLPTM1O96005 669 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 MT-ND1P03886 318 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 SAGP10523 405 aaPredicted RBP13.07□□□□□ -0.32
LIMS3-203ENST00000480744 ACHEP22303 614 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 AQP2P41181 271 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 ARFIP2P53365 341 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 SELENOVP59797 346 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 PLP2Q04941 152 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 TBC1D28Q2M2D7 210 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 LIPNQ5VXI9 398 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 METTL21CQ5VZV1 264 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 UGT2A3Q6UWM9 527 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 DPPA2Q7Z7J5 298 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 LRRC18Q8N456 261 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 RBM15BQ8NDT2 890 aaKnown RBP13.07□□□□□ -0.32
LIMS3-203ENST00000480744 CLDND2Q8NHS1 167 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 YIPF5Q969M3 257 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 LRRC58Q96CX6 371 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 INIPQ9NRY2 104 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 ZNF275Q9NSD4 429 aaPredicted RBP13.07□□□□□ -0.32
LIMS3-203ENST00000480744 RIMS3Q9UJD0 308 aa13.07□□□□□ -0.32
LIMS3-203ENST00000480744 IQCMA0A1B0GVH7 501 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 MRASO14807 208 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 PPIHO43447 177 aaKnown RBP13.06□□□□□ -0.32
LIMS3-203ENST00000480744 TRMUO75648 421 aaKnown RBP13.06□□□□□ -0.32
LIMS3-203ENST00000480744 OR5F1O95221 314 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 RBM34P42696 430 aaKnown RBP13.06□□□□□ -0.32
LIMS3-203ENST00000480744 MAGEB1P43366 347 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 OR1E2P47887 323 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 DAP3P51398 398 aaKnown RBP13.06□□□□□ -0.32
LIMS3-203ENST00000480744 DVL1P1P54792 670 aaPredicted RBP13.06□□□□□ -0.32
LIMS3-203ENST00000480744 KLF3P57682 345 aaPredicted RBP13.06□□□□□ -0.32
LIMS3-203ENST00000480744 ERVS71-1P61550 626 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 HSF2Q03933 536 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 PIN1Q13526 163 aaPredicted RBP13.06□□□□□ -0.32
LIMS3-203ENST00000480744 HDDC2Q7Z4H3 204 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 GLCCI1Q86VQ1 547 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 CALHM3Q86XJ0 350 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 OR8J3Q8NGG0 315 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 OR1J2Q8NGS2 313 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 MOSPD2Q8NHP6 518 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 SYNPRQ8TBG9 265 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 SNX33Q8WV41 574 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 TMEM239Q8WW34 195 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 ASB10Q8WXI3 467 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 LRMDAQ9H2I8 198 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 C1orf198Q9H425 327 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 SAR1AQ9NR31 198 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 C20orf141Q9NUB4 165 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 GPR160Q9UJ42 338 aa13.06□□□□□ -0.32
LIMS3-203ENST00000480744 B4DSR2 109 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 FXYD1O00168 92 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 TCF21O43680 179 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 CDC14BO60729 498 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 SLC2A10O95528 541 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 PTHP01270 115 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 IFNA14P01570 189 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 ACADSP16219 412 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 DRD4P21917 467 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 PCMT1P22061 227 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 CCNOP22674 350 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 APLNRP35414 380 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 CCL8P80075 99 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 GLO1Q04760 184 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 TOP3AQ13472 1001 aaPredicted RBP13.05□□□□□ -0.32
LIMS3-203ENST00000480744 HIST3H3Q16695 136 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 LRRC23Q53EV4 343 aaPredicted RBP13.05□□□□□ -0.32
LIMS3-203ENST00000480744 ERICH5Q6P6B1 374 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 TMEM154Q6P9G4 183 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 C11orf40Q8WZ69 217 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 C1orf159Q96HA4 380 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 ZNF416Q9BWM5 594 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 MRPL13Q9BYD1 178 aaKnown RBP13.05□□□□□ -0.32
LIMS3-203ENST00000480744 KCNN2Q9H2S1 579 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 CCNB1IP1Q9NPC3 277 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 HINT3Q9NQE9 182 aaKnown RBP13.05□□□□□ -0.32
LIMS3-203ENST00000480744 FAM53CQ9NYF3 392 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 TREM2Q9NZC2 230 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 MED31Q9Y3C7 131 aa13.05□□□□□ -0.32
LIMS3-203ENST00000480744 C17orf100A8MU93 164 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 FAM157AC9JC47 383 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 HAX1O00165 279 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 WNT9BO14905 357 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 TPD52L2O43399 206 aaKnown RBP13.04□□□□□ -0.32
LIMS3-203ENST00000480744 PIP5K1CO60331 668 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 CDAP32320 146 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 RAD52P43351 418 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 UCP2P55851 309 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 TMEM33P57088 247 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 FMODQ06828 376 aa13.04□□□□□ -0.32
LIMS3-203ENST00000480744 CD47Q08722 323 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms