RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 NUFIP2Q7Z417 695 aaKnown RBP15.56■□□□□ 0.08
UPF3A-206ENST00000480362 SPARTQ8N0X7 666 aa15.56■□□□□ 0.08
UPF3A-206ENST00000480362 C9orf106Q8NAJ2 232 aa15.56■□□□□ 0.08
UPF3A-206ENST00000480362 GMPPAQ96IJ6 420 aaPredicted RBP15.56■□□□□ 0.08
UPF3A-206ENST00000480362 SIGLEC11Q96RL6 698 aa15.56■□□□□ 0.08
UPF3A-206ENST00000480362 MRPS26Q9BYN8 205 aaKnown RBP15.56■□□□□ 0.08
UPF3A-206ENST00000480362 DIMT1Q9UNQ2 313 aaKnown RBP15.56■□□□□ 0.08
UPF3A-206ENST00000480362 COMMD3-BMI1R4GMX3 469 aa15.56■□□□□ 0.08
UPF3A-206ENST00000480362 ALPK2Q86TB3 2170 aa15.56■□□□□ 0.08
UPF3A-206ENST00000480362 PRRG2O14669 202 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 SS18L1O75177 396 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-206ENST00000480362 HOXD4P09016 255 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-206ENST00000480362 DCKP27707 260 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 AGTR1P30556 359 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 NAA10P41227 235 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-206ENST00000480362 BLVRAP53004 296 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 POU4F2Q12837 409 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 GPR137CQ8N3F9 429 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 POMGNT2Q8NAT1 580 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 SMAP2Q8WU79 429 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-206ENST00000480362 CNN2Q99439 309 aaKnown RBP15.55■□□□□ 0.08
UPF3A-206ENST00000480362 TM9SF2Q99805 663 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 ULBP2Q9BZM5 246 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 ZNF835Q9Y2P0 537 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 PCDHGB1Q9Y5G3 927 aa15.55■□□□□ 0.08
UPF3A-206ENST00000480362 A0A1W2PPL8 197 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 MBD3L4A6NDZ8 208 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-206ENST00000480362 MBD3L3A6NE82 208 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-206ENST00000480362 MBD3L5A6NJ08 208 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-206ENST00000480362 TRIM64CA6NLI5 447 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 J3QRE1 110 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 SELENOFO60613 162 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 CLPTM1O96005 669 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 HLA-DQA2P01906 255 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 EDNRAP25101 427 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 ZNF133P52736 654 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-206ENST00000480362 TUBA4AP68366 448 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 GLO1Q04760 184 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 RBPJQ06330 500 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 GTF3C1Q12789 2109 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 NFATC3Q12968 1075 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 TSPO2Q5TGU0 170 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 OR2A2Q6IF42 318 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 SEM1Q6ZVN7 128 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 DOLPP1Q86YN1 238 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 GLB1L2Q8IW92 636 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 TIGD4Q8IY51 512 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 ZNF100Q8IYN0 542 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 GCNT2Q8N0V5 402 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 MBD3L2Q8NHZ7 208 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-206ENST00000480362 CPT1CQ8TCG5 803 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 CDCA4Q9BXL8 241 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 MARCH7Q9H992 704 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 B3GAT2Q9NPZ5 323 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 FAM215AQ9Y5M1 114 aa15.54■□□□□ 0.08
UPF3A-206ENST00000480362 DHHO43323 396 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SLC19A2O60779 497 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 MPZL1O95297 269 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 IGHA1P01876 353 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 TFP02787 698 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 LAP3P28838 519 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 MAP2K4P45985 399 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 HCCSP53701 268 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SIRPAP78324 504 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 HSF2Q03933 536 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 IRF3Q14653 427 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 C10orf128Q5T292 105 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 OTPQ5XKR4 325 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 C3P1Q6ZMU1 363 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 KCTD8Q6ZWB6 473 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SLC16A9Q7RTY1 509 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-206ENST00000480362 ERI1Q8IV48 349 aaKnown RBP15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SLC35F2Q8IXU6 374 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SVOPQ8N4V2 548 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 OR10H4Q8NGA5 316 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 APH1AQ96BI3 265 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 INTS14Q96SY0 518 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 TBX5Q99593 518 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 RBM24Q9BX46 236 aaKnown RBP15.53■□□□□ 0.08
UPF3A-206ENST00000480362 LINC00470Q9BZP3 86 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SLCO5A1Q9H2Y9 848 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 TP63Q9H3D4 680 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-206ENST00000480362 C12orf49Q9H741 205 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 WDR76Q9H967 626 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SEC61A2Q9H9S3 476 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 SLC7A10Q9NS82 523 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 MRPL22Q9NWU5 206 aaKnown RBP15.53■□□□□ 0.08
UPF3A-206ENST00000480362 TAS2R16Q9NYV7 291 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 UGT2A1Q9Y4X1 527 aa15.53■□□□□ 0.08
UPF3A-206ENST00000480362 OR6C65A6NJZ3 312 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 C12orf71A8MTZ7 269 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 KRT33AO76009 404 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 IGHV3-9P01782 118 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 GAAP10253 952 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 MYL12AP19105 171 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 CDAP32320 146 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 ETV1P50549 477 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 EMX1Q04741 257 aaPredicted RBP15.52■□□□□ 0.08
UPF3A-206ENST00000480362 GUSBP1Q15486 140 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms