RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 KCNAB1Q14722 419 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 STPG1Q5TH74 334 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 PRAMEF17Q5VTA0 474 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 NPSR1Q6W5P4 371 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 EID2Q8N6I1 236 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 TINAGL1Q9GZM7 467 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-210ENST00000478979 ANKRD10Q9NXR5 420 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 EPHA6Q9UF33 1036 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 SLC35A3Q9Y2D2 325 aa12.83□□□□□ -0.36
CCDC78-210ENST00000478979 SSX5O60225 188 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 CSTAP01040 98 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 IGHV4-34P06331 123 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 ZNF806P0C7X5 589 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 LUMP51884 338 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-210ENST00000478979 OVCH1Q7RTY7 1134 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 ZNF433Q8N7K0 673 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-210ENST00000478979 SNX33Q8WV41 574 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 ZNF75AQ96N20 296 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 FOXN4Q96NZ1 517 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 GFI1Q99684 422 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 BCL2L14Q9BZR8 327 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 MYEF2Q9P2K5 600 aaKnown RBP12.82□□□□□ -0.36
CCDC78-210ENST00000478979 WDFY4Q6ZS81 3184 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 AKR7A3O95154 331 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 RPS4Y1P22090 263 aaKnown RBP12.82□□□□□ -0.36
CCDC78-210ENST00000478979 ACAA2P42765 397 aaKnown RBP12.82□□□□□ -0.36
CCDC78-210ENST00000478979 KLHDC3Q9BQ90 382 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 S1PR5Q9H228 398 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 PIGMQ9H3S5 423 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 TMEM185BQ9H7F4 350 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 FOXJ3Q9UPW0 622 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 DPP4P27487 766 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 FOXL2P58012 376 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 PAN3Q58A45 887 aaKnown RBP12.82□□□□□ -0.36
CCDC78-210ENST00000478979 NKAIN2Q5VXU1 208 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 DHRS7BQ6IAN0 325 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-210ENST00000478979 OR2W3Q7Z3T1 314 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 ZNF546Q86UE3 836 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 SPAG16Q8N0X2 631 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 ZNF321PQ8N8H1 164 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 OR1S2Q8NGQ3 325 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 OR6S1Q8NH40 331 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 THAP6Q8TBB0 222 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 SYNPRQ8TBG9 265 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 CMTM3Q96MX0 182 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 TGM7Q96PF1 710 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 PDCD10Q9BUL8 212 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 LMAN2LQ9H0V9 348 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 POT1Q9NUX5 634 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 PCDHB10Q9UN67 800 aa12.82□□□□□ -0.36
CCDC78-210ENST00000478979 TRAV14DV4A0A0A6YYC5 116 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 RFPL4AA6NLU0 287 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 RFPL4AL1F8VTS6 287 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 GFERP55789 205 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 RAB38P57729 211 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 RPS11P62280 158 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 AVPI1Q5T686 147 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 TMPRSS11FQ6ZWK6 438 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 C16orf52Q8NHV5 167 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 STACQ99469 402 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 CDCA3Q99618 268 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 NRSN2Q9GZP1 204 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 GAREM1Q9H706 876 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 GPN3Q9UHW5 284 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 TMEM184BQ9Y519 407 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 A0A087WV62 115 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 ACOD1A6NK06 481 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 TMEM200CA6NKL6 621 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 IFITM5A6NNB3 132 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 ACOT7O00154 380 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 F13BP05160 661 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 CDK2P24941 298 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 PPIAP62937 165 aaKnown RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 FZD2Q14332 565 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 RBMS2Q15434 407 aaKnown RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 RBMS3Q6XE24 437 aaKnown RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 FAM131CQ96AQ9 280 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 SMIM19Q96E16 107 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 S100A16Q96FQ6 103 aaKnown RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 HSPA12BQ96MM6 686 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 DGAT2Q96PD7 388 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 NOX4Q9NPH5 578 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 PRTFDC1Q9NRG1 225 aa12.81□□□□□ -0.36
CCDC78-210ENST00000478979 PNO1Q9NRX1 252 aaKnown RBP12.81□□□□□ -0.36
CCDC78-210ENST00000478979 SULT1B1O43704 296 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 NKX2-2O95096 273 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 SLC35E2P0CK97 266 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 EDNRAP25101 427 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 BDKRB2P30411 391 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 SLC6A6P31641 620 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 CDK5R1Q15078 307 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 UQCC3Q6UW78 93 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 C19orf47Q8N9M1 422 aaKnown RBP12.8□□□□□ -0.36
CCDC78-210ENST00000478979 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
CCDC78-210ENST00000478979 GAL3ST4Q96RP7 486 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms