RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 OR1J4Q8NGS1 313 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 OR6K3Q8NGY3 331 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 KIF18AQ8NI77 898 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 TFB1MQ8WVM0 346 aaKnown RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 ANKRD7Q92527 254 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 FOXN4Q96NZ1 517 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 DHRS9Q9BPW9 319 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 SOSTQ9BQB4 213 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 OR8D2Q9GZM6 311 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 GANQ9H2C0 597 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 MTHFD2LQ9H903 347 aaPredicted RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 RNF122Q9H9V4 155 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 PRTFDC1Q9NRG1 225 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.66□□□□□ -1.82
VPS50-214ENST00000477935 LCMT1Q9UIC8 334 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 MGAT4BQ9UQ53 548 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 MRPS18CQ9Y3D5 142 aaKnown RBP3.66□□□□□ -1.82
VPS50-214ENST00000477935 ZNF175Q9Y473 711 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 ATP6V1DQ9Y5K8 247 aa3.66□□□□□ -1.82
VPS50-214ENST00000477935 DNAH1Q9P2D7 4330 aa3.65□□□□□ -1.82
VPS50-214ENST00000477935 DPRXA6NFQ7 191 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 TMCO5BA8MYB1 307 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 C17orf105B2RV13 164 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 NPIPB9F8W1W9 429 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 SLC1A7O00341 560 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 LCMT2O60294 686 aaKnown RBP3.65□□□□□ -1.83
VPS50-214ENST00000477935 CATP04040 527 aaKnown RBP3.65□□□□□ -1.83
VPS50-214ENST00000477935 TACSTD2P09758 323 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 CCDC175P0C221 793 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 RHOXF2BP0C7M4 288 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 ZNF708P17019 499 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 PRTN3P24158 256 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 KDELR1P24390 212 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 MSNP26038 577 aaKnown RBP3.65□□□□□ -1.83
VPS50-214ENST00000477935 ATP5DP30049 168 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 ADRA1AP35348 466 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 BDKRB1P46663 353 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 TMED10P49755 219 aaKnown RBP3.65□□□□□ -1.83
VPS50-214ENST00000477935 LHX2P50458 406 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 CLDN18P56856 261 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 BSPH1Q075Z2 132 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 STX4Q12846 297 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 PRPSAP1Q14558 356 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 FAM189A2Q15884 450 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 ZSWIM7Q19AV6 140 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 KBTBD12Q3ZCT8 623 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 KPRPQ5T749 579 aaPredicted RBP3.65□□□□□ -1.83
VPS50-214ENST00000477935 CASC4Q6P4E1 433 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 TRAT1Q6PIZ9 186 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 SBSNQ6UWP8 590 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 C17orf107Q6ZR85 190 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 YRDCQ86U90 279 aaKnown RBP3.65□□□□□ -1.83
VPS50-214ENST00000477935 IFNEQ86WN2 208 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 BPIFB2Q8N4F0 458 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 MRAPQ8TCY5 172 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 RASL10AQ92737 203 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 DNAJC1Q96KC8 554 aaKnown RBP3.65□□□□□ -1.83
VPS50-214ENST00000477935 RILPQ96NA2 401 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 GAL3ST4Q96RP7 486 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 NDNQ99608 321 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 RHBGQ9H310 441 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 FN3KQ9H479 309 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 ACTR8Q9H981 624 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 GLRX2Q9NS18 164 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 HOMER3Q9NSC5 361 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
VPS50-214ENST00000477935 NINQ8N4C6 2090 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 DYNC2H1Q8NCM8 4307 aaKnown RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 SHISA9B4DS77 424 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 C3orf84H3BNL1 204 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 K7EQD1 137 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 CCL22O00626 93 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 PRMT5O14744 637 aaPredicted RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 SURF4O15260 269 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 ZBTB14O43829 449 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 OR1I1O60431 355 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 RAMP1O60894 148 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 PSIP1O75475 530 aaKnown RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 HSPA4LO95757 839 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 SLC16A8O95907 504 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 IGHV3-13P01766 116 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 TPM2P07951 284 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 SMIM10L1P0DMW3 83 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 AADACP22760 399 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 GIFP27352 417 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 SFTPDP35247 375 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 CASP3P42574 277 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 NPY2RP49146 381 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 FABP6P51161 128 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 MTCP1P56278 107 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 CTBP2P56545 445 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 CCZ1BP86790 482 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 CCZ1P86791 482 aaPredicted RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 COX10Q12887 443 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 GUSBP1Q15486 140 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 ZNHIT3Q15649 155 aaPredicted RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 PTRHD1Q6GMV3 140 aaKnown RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 C17orf64Q86WR6 236 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 LRRC6Q86X45 466 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 SPAG16Q8N0X2 631 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms