RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 C11orf88Q6PI97 169 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 EPGNQ6UW88 154 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 RNF165Q6ZSG1 346 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 COX8CQ7Z4L0 72 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 VN1R4Q7Z5H5 301 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 MEX3DQ86XN8 651 aaKnown RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 METTL4Q8N3J2 472 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 RNF175Q8N4F7 328 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 C17orf47Q8NEP4 570 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 STARD8Q92502 1023 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 NXPE2Q96DL1 559 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 MS4A6EQ96DS6 147 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 TM4SF19Q96DZ7 209 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 SLC45A3Q96JT2 553 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 CATSPER2Q96P56 530 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 GAL3ST4Q96RP7 486 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ZBTB18Q99592 522 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 CTRCQ99895 268 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 C17orf62Q9BQA9 187 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ALKBH7Q9BT30 221 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 C1orf50Q9BV19 199 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 FAIM2Q9BWQ8 316 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 ACPTQ9BZG2 426 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 WDR55Q9H6Y2 383 aaPredicted RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 WDR41Q9HAD4 459 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 GNB4Q9HAV0 340 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 B3GAT2Q9NPZ5 323 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 FBXO8Q9NRD0 319 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 STARD5Q9NSY2 213 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 CUTCQ9NTM9 273 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 MRGBPQ9NV56 204 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 LYARQ9NX58 379 aaKnown RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 PHF11Q9UIL8 331 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 FBXW2Q9UKT8 454 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 MRPS33Q9Y291 106 aaKnown RBP3.2□□□□□ -1.9
UBR3-209ENST00000477461 ARL2BPQ9Y2Y0 163 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 TMED5Q9Y3A6 229 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 SLC22A7Q9Y694 548 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 PTPRBP23467 1997 aa3.2□□□□□ -1.9
UBR3-209ENST00000477461 SEC16AO15027 2179 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 CNOT1A5YKK6 2376 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 A0A0A6YYC8 382 aaPredicted RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 hCG_38984A0A1B0GV85 526 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 A0A1B0GX78 115 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 FAM149AA5PLN7 773 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 OOEPA6NGQ2 149 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ZNF860A6NHJ4 632 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ACOD1A6NK06 481 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 A8MVM7 634 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 KLLNB2CW77 178 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 C9J4A7 227 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 H0YIG0 161 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 I3L1I5 382 aaPredicted RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 SGK494L7N484 410 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 PLPP1O14494 284 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 PHOX2AO14813 284 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 LSM1O15116 133 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 CASC3O15234 703 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 HCRTR1O43613 425 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 SELENOFO60613 162 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 GALR3O60755 368 aaPredicted RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 RDH16O75452 317 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 KIAA0754O94854 1291 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 TNFSF15O95150 251 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 NXPH4O95158 308 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 LRATO95237 230 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 NSA2O95478 260 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 ETHE1O95571 254 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 KLK1P06870 262 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 CCL4P13236 92 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 RNH1P13489 461 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 IDO1P14902 403 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 HIST1H1TP22492 207 aaPredicted RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 CPN2P22792 545 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ATP5A1P25705 553 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 PPP2R1BP30154 601 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 SOAT1P35610 550 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 IER3P46695 156 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 RAB38P57729 211 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 KCNK10P57789 538 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 TRA2BP62995 288 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 DCDP81605 110 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 ZNF763Q0D2J5 394 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 C2orf80Q0P641 193 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 SLAMF1Q13291 335 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 FAM53BQ14153 422 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 HEPACAMQ14CZ8 416 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 MAPRE2Q15555 327 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ADPRMQ3LIE5 342 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 RNF212Q495C1 297 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 C1orf189Q5VU69 101 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 METTL21CQ5VZV1 264 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 FAM219BQ5XKK7 198 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 CGB2Q6NT52 195 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 RHBDD2Q6NTF9 364 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 NOXRED1Q6NXP6 359 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 PRMT9Q6P2P2 845 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 DHRS11Q6UWP2 260 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 COMMD6Q7Z4G1 85 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 GALNTL5Q7Z4T8 443 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms