RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ABCE1P61221 599 aaKnown RBP8.2□□□□□ -1.1
COL4A5-204ENST00000477429 PAX8Q06710 450 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 PUDPQ08623 228 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 PMS2P3Q13401 168 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 LARS2Q15031 903 aaKnown RBP8.2□□□□□ -1.1
COL4A5-204ENST00000477429 ZMYND11Q15326 602 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 DPY19L1Q2PZI1 675 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 DEFB112Q30KQ8 113 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 ALG10BQ5I7T1 473 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 C16orf87Q6PH81 154 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 LIAT1Q6ZQX7 453 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 RFPL4BQ6ZWI9 263 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 PIWIL3Q7Z3Z3 882 aaKnown RBP8.2□□□□□ -1.1
COL4A5-204ENST00000477429 CNPY4Q8N129 248 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 OR1J1Q8NGS3 322 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 C11orf40Q8WZ69 217 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 SLC25A28Q96A46 364 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 MARS2Q96GW9 593 aaKnown RBP8.2□□□□□ -1.1
COL4A5-204ENST00000477429 ZIM3Q96PE6 472 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 SIGLEC11Q96RL6 698 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 POFUT1Q9H488 388 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 DENND2DQ9H6A0 471 aaPredicted RBP8.2□□□□□ -1.1
COL4A5-204ENST00000477429 MEAF6Q9HAF1 191 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 TPT1P8Q9HAU6 139 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 CDH20Q9HBT6 801 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 MSL2Q9HCI7 577 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 MRPL39Q9NYK5 338 aaKnown RBP8.2□□□□□ -1.1
COL4A5-204ENST00000477429 TAS2R5Q9NYW4 299 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 GLTPQ9NZD2 209 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 KLHL21Q9UJP4 597 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
COL4A5-204ENST00000477429 MMP24Q9Y5R2 645 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 TANC2Q9HCD6 1990 aa8.2□□□□□ -1.1
COL4A5-204ENST00000477429 A0A0B4J2E0 115 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 A0A1B0GX12 115 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 ZNF726A6NNF4 738 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 RFXANKO14593 260 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 DHHO43323 396 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 MGRN1O60291 552 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 KRT75O95678 551 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 PLATP00750 562 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 SERPINE1P05121 402 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 BGNP21810 368 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 AHCYP23526 432 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 EPHA3P29320 983 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 CDAP32320 146 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 CDH12P55289 794 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 OR1Q1Q15612 314 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 OGFOD2Q6N063 350 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 BRD3OSQ6XYD6 125 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 Q6ZR03 302 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 TREML1Q86YW5 311 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 NUDCD3Q8IVD9 361 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 MSRB3Q8IXL7 192 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 LRRC18Q8N456 261 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 TRIML2Q8N7C3 387 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 OR9I1Q8NGQ6 314 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 SLC25A40Q8TBP6 338 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 SNX33Q8WV41 574 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 DACT3Q96B18 629 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-204ENST00000477429 TRIM44Q96DX7 344 aaPredicted RBP8.19□□□□□ -1.1
COL4A5-204ENST00000477429 TIMD4Q96H15 378 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 POM121L2Q96KW2 1035 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 ZNF347Q96SE7 839 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 GPA33Q99795 319 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 RBM4BQ9BQ04 359 aaKnown RBP8.19□□□□□ -1.1
COL4A5-204ENST00000477429 OR2J1Q9GZK6 312 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 RNF121Q9H920 327 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 MARCH7Q9H992 704 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 C12orf10Q9HB07 376 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 PATZ1Q9HBE1 687 aaKnown RBP8.19□□□□□ -1.1
COL4A5-204ENST00000477429 BCL2L10Q9HD36 194 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 B3GAT2Q9NPZ5 323 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 SLCO1C1Q9NYB5 712 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 RPS6KB2Q9UBS0 482 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 LGALS13Q9UHV8 139 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 HAO1Q9UJM8 370 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 RAP2CQ9Y3L5 183 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 NPTNQ9Y639 398 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
COL4A5-204ENST00000477429 A6NHS1 94 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 A8MXK9 166 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 AKAP8O43823 692 aaKnown RBP8.18□□□□□ -1.1
COL4A5-204ENST00000477429 FOXH1O75593 365 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 ZNF205O95201 554 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 QDPRP09417 244 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 MYZAPP0CAP1 466 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 PGA4P0DJD7 388 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 PGA3P0DJD8 388 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 CCNOP22674 350 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 SLC1A6P48664 564 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 ERFP50548 548 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 RPL14P50914 215 aaKnown RBP8.18□□□□□ -1.1
COL4A5-204ENST00000477429 ANXA11P50995 505 aaKnown RBP8.18□□□□□ -1.1
COL4A5-204ENST00000477429 TXNL4AP83876 142 aaKnown RBP8.18□□□□□ -1.1
COL4A5-204ENST00000477429 HOXA4Q00056 320 aaPredicted RBP8.18□□□□□ -1.1
COL4A5-204ENST00000477429 TEKQ02763 1124 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 RGNQ15493 299 aa8.18□□□□□ -1.1
COL4A5-204ENST00000477429 NPTX1Q15818 432 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms