RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 DCTDP32321 178 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 EVI2BP34910 448 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 NUDT1P36639 197 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 CDKN2AP42771 156 aaKnown RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 CCR5P51681 352 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 DCDP81605 110 aaKnown RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 RAB12Q6IQ22 244 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF704Q6ZNC4 412 aaPredicted RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 FAM57BQ71RH2 274 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 SSX6Q7RTT6 188 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 GPR155Q7Z3F1 870 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 GLB1L2Q8IW92 636 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 IQCF2Q8IXL9 164 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 ARIH2OSQ8N7S6 290 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 HSD17B8Q92506 261 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 KIAA1143Q96AT1 154 aaPredicted RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 FAM3DQ96BQ1 224 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 DDOQ99489 341 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 SLA2Q9H6Q3 261 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 FSCN3Q9NQT6 498 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 A0A0A6YYJ9 748 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 A6NCN8 305 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 IFITM5A6NNB3 132 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 LMO7DNF2Z398 122 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 RAB40ALP0C0E4 278 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 DDOSTP39656 456 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 C17orf67Q0P5P2 114 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 TOMM34Q15785 309 aaPredicted RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 YIF1BQ5BJH7 314 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 CMIPQ8IY22 773 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 SHISA5Q8N114 240 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 BPIFB2Q8N4F0 458 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 RHBDD1Q8TEB9 315 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 FBLIM1Q8WUP2 373 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 RAB40AQ8WXH6 277 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 HIST1H2AAQ96QV6 131 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 OR51B6Q9H340 312 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 ADGRL4Q9HBW9 690 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 MMACHCQ9Y4U1 282 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 POLEQ07864 2286 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 WRBO00258 174 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 PRH1P02810 166 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 P04436 131 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 MSL3P1P0C860 447 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 ERGP11308 486 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 HOXB9P17482 250 aaPredicted RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM244Q5VVB8 128 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 IDO2Q6ZQW0 420 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 OR6F1Q8NGZ6 308 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 TOMM40LQ969M1 308 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 OR2M2Q96R28 347 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 URM1Q9BTM9 101 aaKnown RBP10.03□□□□□ -0.8
COL27A1-204ENST00000477421 AICDAQ9GZX7 198 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 MFFQ9GZY8 342 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 EMC7Q9NPA0 242 aa10.03□□□□□ -0.8
COL27A1-204ENST00000477421 A6NIZ1 184 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 AKAIN1P0CW23 69 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 HTR2CP28335 458 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 CD34P28906 385 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 CLDN17P56750 224 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 RAP1BP61224 184 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 RPL27P61353 136 aaKnown RBP10.02□□□□□ -0.8
COL27A1-204ENST00000477421 RAP1AP62834 184 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 CHRFAM7AQ494W8 412 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 OR51S1Q8NGJ8 323 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 ELP5Q8TE02 316 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 C10orf90Q96M02 699 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 SFXN2Q96NB2 322 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 MCCC2Q9HCC0 563 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 PARPBPQ9NWS1 579 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 SLCO1C1Q9NYB5 712 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 TAS2R3Q9NYW6 316 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 V9GYH0 126 aa10.02□□□□□ -0.8
COL27A1-204ENST00000477421 TSPAN9O75954 239 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 LIMS1P48059 325 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF84P51523 738 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 GPR85P60893 370 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 LCN10Q6JVE6 187 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 HEPHL1Q6MZM0 1159 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF767PQ75MW2 155 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 OR7G1Q8NGA0 311 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 ZNF578Q96N58 590 aaPredicted RBP10.02□□□□□ -0.81
COL27A1-204ENST00000477421 C20orf85Q9H1P6 137 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 ISYNA1Q9NPH2 558 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 CLEC1BQ9P126 229 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 ALOX12BO75342 701 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 SC5DO75845 299 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 GPLD1P80108 840 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 SORDQ00796 357 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 FAM199XQ6PEV8 388 aaPredicted RBP10.02□□□□□ -0.81
COL27A1-204ENST00000477421 GRINAQ7Z429 371 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 SLC22A18ASQ8N1D0 253 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 RFLNBQ8N5W9 214 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 OR2G2Q8NGZ5 317 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 TAAR8Q969N4 342 aa10.02□□□□□ -0.81
COL27A1-204ENST00000477421 RNF32Q9H0A6 362 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms