RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 A0A0B4J2E0 115 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 A0A1B0GX12 115 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 CLIC1O00299 241 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 HDAC3O15379 428 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 DHHO43323 396 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 IGHV1-46P01743 117 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 VIMP08670 466 aaKnown RBP10.68□□□□□ -0.7
SKA3-206ENST00000475251 CCL2P13500 99 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 MTNR1AP48039 350 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 RGS8P57771 180 aaPredicted RBP10.68□□□□□ -0.7
SKA3-206ENST00000475251 ERVS71-1P61550 626 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 GLO1Q04760 184 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 ZNF718Q3SXZ3 478 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 SLC35D2Q76EJ3 337 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 KLHL36Q8N4N3 616 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 SPICQ8N5J4 248 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 DEFB108BQ8NET1 73 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 FGFBP3Q8TAT2 258 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 MAL2Q969L2 176 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 VPS33AQ96AX1 596 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 DUX5Q96PT3 197 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 SH3GL3Q99963 347 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 SLC19A3Q9BZV2 496 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 MS4A7Q9GZW8 240 aaPredicted RBP10.68□□□□□ -0.7
SKA3-206ENST00000475251 KCNN2Q9H2S1 579 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 PNPOQ9NVS9 261 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 ZIM2Q9NZV7 527 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 EIF3KQ9UBQ5 218 aaKnown RBP10.68□□□□□ -0.7
SKA3-206ENST00000475251 LEF1Q9UJU2 399 aaPredicted RBP10.68□□□□□ -0.7
SKA3-206ENST00000475251 CACNG2Q9Y698 323 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 WNK2Q9Y3S1 2297 aa10.68□□□□□ -0.7
SKA3-206ENST00000475251 A0A1B0GUS0 222 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 C11orf98E9PRG8 122 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 SPRY3O43610 288 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 UBOX5O94941 541 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 IGHMP01871 453 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ADH4P08319 380 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 MAKP20794 623 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 BGNP21810 368 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ZFP36P26651 326 aaKnown RBP10.67□□□□□ -0.7
SKA3-206ENST00000475251 EPHA3P29320 983 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ZNF84P51523 738 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 HSF2Q03933 536 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ZNF154Q13106 437 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 OR1Q1Q15612 314 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 GTDC1Q4AE62 458 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 CEP85LQ5SZL2 805 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 NXNQ6DKJ4 435 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 REEP3Q6NUK4 255 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 WDR88Q6ZMY6 472 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ZNF771Q7L3S4 317 aaPredicted RBP10.67□□□□□ -0.7
SKA3-206ENST00000475251 GOLGA6L1Q8N7Z2 621 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 OR4K5Q8NGD3 323 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ZNF607Q96SK3 696 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ZNF69Q9UC07 566 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 ZDHHC8Q9ULC8 765 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 POLR3KQ9Y2Y1 108 aaPredicted RBP10.67□□□□□ -0.7
SKA3-206ENST00000475251 NPTNQ9Y639 398 aa10.67□□□□□ -0.7
SKA3-206ENST00000475251 H3BSA7 217 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 RNF13O43567 381 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 SERPINB7O75635 380 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 IGHG1P01857 330 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 QDPRP09417 244 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 CCNOP22674 350 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 MMP15P51511 669 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 POLR2JP52435 117 aaKnown RBP10.66□□□□□ -0.7
SKA3-206ENST00000475251 CDH12P55289 794 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 CLRN1P58418 232 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 BST1Q10588 318 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 GCNT6Q5T4J0 391 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 ZNF613Q6PF04 617 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 LRFN4Q6PJG9 635 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 HDDC2Q7Z4H3 204 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 HIPK4Q8NE63 616 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 TMEM109Q9BVC6 243 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 C1QTNF5Q9BXJ0 243 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 WDR55Q9H6Y2 383 aaPredicted RBP10.66□□□□□ -0.7
SKA3-206ENST00000475251 NANSQ9NR45 359 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 SDR39U1Q9NRG7 319 aaPredicted RBP10.66□□□□□ -0.7
SKA3-206ENST00000475251 MMP24Q9Y5R2 645 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 TGP01266 2768 aa10.66□□□□□ -0.7
SKA3-206ENST00000475251 TRRAPQ9Y4A5 3859 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 CENPBD1B2RD01 187 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 LRRN3E7EW58 273 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 RGS16O15492 202 aaPredicted RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 FMO6PO60774 539 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 HIST1H2ABP04908 130 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 PGA4P0DJD7 388 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 PGA3P0DJD8 388 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 PPIAL4GP0DN37 164 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 ZNF12P17014 697 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 PPIBP23284 216 aaKnown RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 STOMP27105 288 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 CDK6Q00534 326 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 SLC9A3R2Q15599 337 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 TMEM155Q4W5P6 130 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 ZNF362Q5T0B9 420 aaPredicted RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 HHATQ5VTY9 493 aa10.65□□□□□ -0.7
SKA3-206ENST00000475251 MBNL2Q5VZF2 373 aaKnown RBP10.65□□□□□ -0.7
SKA3-206ENST00000475251 LEG1Q6P5S2 330 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms