RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SPARCP09486 303 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 ST6GAL1P15907 406 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 CXCL2P19875 107 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 TPSB2P20231 275 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 HTR2AP28223 471 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 LBX1P52954 281 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 HCCSP53701 268 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 SLC25A3Q00325 362 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 MEF2DQ14814 521 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 TPSAB1Q15661 275 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 PGGHGQ32M88 737 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 KHDC3LQ587J8 217 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 C9orf50Q5SZB4 431 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 HECTD2Q5U5R9 776 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 SLC47A2Q86VL8 602 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 LINC01465Q8N7H1 131 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 CLEC1AQ8NC01 280 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 MDGA1Q8NFP4 955 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 OR52B6Q8NGF0 335 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 OR4P4Q8NGL7 312 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 SLC2A12Q8TD20 617 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 TCTEX1D2Q8WW35 142 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 DNASE2BQ8WZ79 361 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 RERGQ96A58 199 aaPredicted RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 RPUSD4Q96CM3 377 aaKnown RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 LRTM1Q9HBL6 345 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 RBM22Q9NW64 420 aaKnown RBP eCLIP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 GAR1Q9NY12 217 aaKnown RBP4.4□□□□□ -1.7
NPHP3-206ENST00000474871 TAS2R14Q9NYV8 317 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 FRRS1LQ9P0K9 344 aa4.4□□□□□ -1.7
NPHP3-206ENST00000474871 A0A1W2PPV9 198 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 A0A1W2PRX2 142 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ANXA2P2A6NMY6 339 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 MYO1GB0I1T2 1018 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 TSTD3H0UI37 97 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 P2RY10O00398 339 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 LDB2O43679 373 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 GRAP2O75791 330 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 LIPCP11150 499 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 EGR1P18146 543 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 SSTR5P35346 364 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 RPL3P39023 403 aaKnown RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 GALCP54803 685 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 FOXL2P58012 376 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 SDHAF4Q5VUM1 108 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 TMPPEQ6ZT21 453 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 C15orf54Q8N8G6 183 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 PROKR2Q8NFJ6 384 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 EDEM1Q92611 657 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 NKD1Q969G9 470 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 MBD6Q96DN6 1003 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 OR6C1Q96RD1 312 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 UBL7Q96S82 380 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ABHD14AQ9BUJ0 271 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 FAIM2Q9BWQ8 316 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 MS4A8Q9BY19 250 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 TKTL2Q9H0I9 626 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 PCDHAC1Q9H158 963 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF395Q9H8N7 513 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 RNF121Q9H920 327 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ACTR8Q9H981 624 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 CISHQ9NSE2 258 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ENTPD2Q9Y5L3 495 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF106Q9H2Y7 1883 aaKnown RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 MCM3APO60318 1980 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 MEIKINA0A087WXM9 373 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 GGCTO75223 188 aaKnown RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 GJB5O95377 273 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 CST1P01037 141 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 TGFB1P01137 390 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ITGB2P05107 769 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 CXCL8P10145 99 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 RPA2P15927 270 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 CRHBPP24387 322 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 TNFSF9P41273 254 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 GPR1P46091 355 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 SLC6A11P48066 632 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 DUSP3P51452 185 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 CXADRP78310 365 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 FGFBP1Q14512 234 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 UBXN2BQ14CS0 331 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 JOSD1Q15040 202 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 PRSS53Q2L4Q9 553 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 MROH9Q5TGP6 573 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 SLC23A3Q6PIS1 610 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 LRRC70Q7Z2Q7 622 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 TRAPPC5Q8IUR0 188 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF614Q8N883 585 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 RHEBL1Q8TAI7 183 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 CNOT9Q92600 299 aaKnown RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 UBE2FQ969M7 185 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ORAI1Q96D31 301 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 RNFT2Q96EX2 444 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 PLEKHB1Q9UF11 243 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF223Q9UK11 482 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ICAM5Q9UMF0 924 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 ANK1P16157 1881 aa4.4□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM269A0A1B0GVZ9 245 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 MYADML2A6NDP7 307 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TVP23AA6NH52 213 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms