RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 HIPK1Q86Z02 1210 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ZDHHC13Q8IUH4 622 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 UBE2J2Q8N2K1 259 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 PARP8Q8N3A8 854 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 SVOPLQ8N434 492 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 LNX2Q8N448 690 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 POMGNT2Q8NAT1 580 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 NPEPL1Q8NDH3 523 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ICA1LQ8NDH6 482 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 MAGEE2Q8TD90 523 aaPredicted RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ZNRF4Q8WWF5 429 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 BCL2L2Q92843 193 aaPredicted RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 MCHR2Q969V1 340 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 S100PBPQ96BU1 408 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 BOD1Q96IK1 185 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ADAD1Q96M93 576 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 MUS81Q96NY9 551 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 CIB1Q99828 191 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 TSSK6Q9BXA6 273 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 OSBPL10Q9BXB5 764 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 POLDIP3Q9BY77 421 aaKnown RBP6.12□□□□□ -1.43
LIMD1-204ENST00000474665 CRLF2Q9HC73 371 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ASB6Q9NWX5 421 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ELOVL5Q9NYP7 299 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF224Q9NZL3 707 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 CRIM1Q9NZV1 1036 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 TLN2Q9Y4G6 2542 aa6.12□□□□□ -1.43
LIMD1-204ENST00000474665 A0A096LPE4 126 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 A0A1W2PPR1 153 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 A0A1W2PPZ6 126 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 A0A1W2PR80 420 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 PRSS37A4D1T9 235 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 CENPBD1B2RD01 187 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 INAFM1C9JVW0 142 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF587BE7ETH6 402 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 EI24O14681 340 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 RAD51DO75771 328 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 SEC14L2O76054 403 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 IGHG1P01857 330 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 QDPRP09417 244 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 OSMP13725 252 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NOS3P29474 1203 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 SLC6A6P31641 620 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 GIPRP48546 466 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 CSNK1A1P48729 337 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 EFNB1P98172 346 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 CDK5Q00535 292 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 SORDQ00796 357 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 KRR1Q13601 381 aaKnown RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 GINS1Q14691 196 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 HIKESHIQ53FT3 197 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 SLC35F1Q5T1Q4 408 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 C10orf128Q5T292 105 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 TMEM236Q5W0B7 351 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 OTPQ5XKR4 325 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 GPR139Q6DWJ6 353 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 BHLHA15Q7RTS1 189 aaPredicted RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 GPR137CQ8N3F9 429 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 CBR4Q8N4T8 237 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 ATG16L2Q8NAA4 619 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 CYB561A3Q8NBI2 242 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NOXO1Q8NFA2 376 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 OR1K1Q8NGR3 316 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 OR6N1Q8NGY5 312 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 OR4K13Q8NH42 304 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 FGFBP3Q8TAT2 258 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NRG4Q8WWG1 115 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 KISS1RQ969F8 398 aaPredicted RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF566Q969W8 418 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NABP1Q96AH0 204 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF570Q96NI8 536 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 TSSK2Q96PF2 358 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 ERMAPQ96PL5 475 aaPredicted RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NMNAT3Q96T66 252 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 ALG12Q9BV10 488 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 IFT27Q9BW83 186 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 RBM4Q9BWF3 364 aaKnown RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 HCAR1Q9BXC0 346 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NMNAT2Q9BZQ4 307 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 ACTR6Q9GZN1 396 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 SYT4Q9H2B2 425 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NOX3Q9HBY0 568 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 KRCC1Q9NPI7 259 aaPredicted RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 PAPOLBQ9NRJ5 636 aaKnown RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 TAS2R16Q9NYV7 291 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 USE1Q9NZ43 259 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 NPAP1Q9NZP6 1156 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
LIMD1-204ENST00000474665 UPB1Q9UBR1 384 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 GPR52Q9Y2T5 361 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 SLC25A15Q9Y619 301 aa6.11□□□□□ -1.43
LIMD1-204ENST00000474665 RAI1Q7Z5J4 1906 aaPredicted RBP6.1□□□□□ -1.43
LIMD1-204ENST00000474665 IGLV1-36A0A0B4J1U3 117 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 TUBAL3A6NHL2 446 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 A6NIZ1 184 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 OR6C65A6NJZ3 312 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 OR5H1A6NKK0 313 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 DEFB108AA8MXU0 73 aa6.1□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF99A8MXY4 864 aaPredicted RBP6.1□□□□□ -1.43
LIMD1-204ENST00000474665 M0R129 80 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms