RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 HEXAP06865 529 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 GSTM3P21266 225 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 FPR3P25089 353 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 ARR3P36575 388 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 RPL4P36578 427 aaKnown RBP16.24■□□□□ 0.19
CCDC171-206ENST00000474193 AQP2P41181 271 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 RPL18Q07020 188 aaKnown RBP16.24■□□□□ 0.19
CCDC171-206ENST00000474193 SPOCK1Q08629 439 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 LAPTM4AQ15012 233 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 ALG10Q5BKT4 473 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 PGBD2Q6P3X8 592 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 AMIGO2Q86SJ2 522 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 HIPK1Q86Z02 1210 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 FAM169BQ8N8A8 192 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 AQP11Q8NBQ7 271 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 IL17RDQ8NFM7 739 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 OR9Q2Q8NGE9 314 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 OR13C2Q8NGS9 318 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 OR5K1Q8NHB7 308 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 CENPNQ96H22 339 aaPredicted RBP16.24■□□□□ 0.19
CCDC171-206ENST00000474193 TNFRSF13CQ96RJ3 184 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 SMR3AQ99954 134 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 RHNO1Q9BSD3 238 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 EMC6Q9BV81 110 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 KATNB1Q9BVA0 655 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 CACNG6Q9BXT2 260 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 INIPQ9NRY2 104 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 KIF17Q9P2E2 1029 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 HIF3AQ9Y2N7 669 aa16.24■□□□□ 0.19
CCDC171-206ENST00000474193 ARRDC5A6NEK1 342 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 MCIDASD6RGH6 385 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 G3V2T6 193 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 H0YHG0 523 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 CDC42EP2O14613 210 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 LY6G6DO95868 133 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 HPRP00739 348 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 GASTP01350 101 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 HLA-DOBP13765 273 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 CBR1P16152 277 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 ZNF23P17027 643 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 NUDT6P53370 316 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 DSCR9P59020 149 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 TSPAN31Q12999 210 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 TNK1Q13470 666 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 CAMK2DQ13557 499 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 SHQ1Q6PI26 577 aaKnown RBP16.23■□□□□ 0.19
CCDC171-206ENST00000474193 Q71RC1 249 aaPredicted RBP16.23■□□□□ 0.19
CCDC171-206ENST00000474193 LINGO2Q7L985 606 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 HDDC2Q7Z4H3 204 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 ZDHHC13Q8IUH4 622 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 C20orf196Q8IYI0 205 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 TMEM123Q8N131 208 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 CIARTQ8N365 385 aaPredicted RBP16.23■□□□□ 0.19
CCDC171-206ENST00000474193 SVOPLQ8N434 492 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 ATG16L2Q8NAA4 619 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 OR4F15Q8NGB8 312 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 NANOS1Q8WY41 292 aaKnown RBP16.23■□□□□ 0.19
CCDC171-206ENST00000474193 ULBP2Q9BZM5 246 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 SEMA6AQ9H2E6 1030 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 MED29Q9NX70 200 aa16.23■□□□□ 0.19
CCDC171-206ENST00000474193 IGHV1-18A0A0C4DH31 117 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 ATP6V1G2-DDX39BF2Z307 99 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 SSX4O60224 188 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 NDUFB2O95178 105 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 BAG2O95816 211 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 BCL10O95999 233 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 F13BP05160 661 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 ANXA8P13928 327 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 CSNK1A1P48729 337 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 DAP3P51398 398 aaKnown RBP16.22■□□□□ 0.19
CCDC171-206ENST00000474193 RPL13AP3Q6NVV1 102 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 SMARCD3Q6STE5 483 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 SLC35D2Q76EJ3 337 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 MOSPD2Q8NHP6 518 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 TXNDC15Q96J42 360 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 FEVQ99581 238 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 DGCR6LQ9BY27 220 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 NTN4Q9HB63 628 aa16.22■□□□□ 0.19
CCDC171-206ENST00000474193 STX18Q9P2W9 335 aaKnown RBP16.22■□□□□ 0.19
CCDC171-206ENST00000474193 FBXO9Q9UK97 447 aaPredicted RBP16.22■□□□□ 0.19
CCDC171-206ENST00000474193 PLCE1Q9P212 2302 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 H3BNX3 289 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 IGHV4-39P01824 125 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 TP53P04637 393 aaPredicted RBP16.21■□□□□ 0.19
CCDC171-206ENST00000474193 IFNGR1P15260 489 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 ACVR1BP36896 505 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 GSSP48637 474 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 BIDP55957 195 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 CTXN1P60606 82 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 TUBA1BP68363 451 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 TUBA4AP68366 448 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 PPP2R2BQ00005 443 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 COX10Q12887 443 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 ZNF770Q6IQ21 691 aaPredicted RBP16.21■□□□□ 0.19
CCDC171-206ENST00000474193 CLEC2AQ6UVW9 174 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 ZNF813Q6ZN06 617 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 TUBA1AQ71U36 451 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 TMEM179BQ7Z7N9 219 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 ICA1LQ8NDH6 482 aa16.21■□□□□ 0.19
CCDC171-206ENST00000474193 OR52L1Q8NGH7 329 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms