RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 EBPQ15125 230 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ANGPT1Q15389 498 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CD226Q15762 336 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 KCNJ8Q15842 424 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ATAD3CQ5T2N8 411 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 FAM69AQ5T7M9 428 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 FNDC7Q5VTL7 733 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 LYSMD4Q5XG99 296 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC22A10Q63ZE4 541 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC18B1Q6NT16 456 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF585AQ6P3V2 769 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 KCTD18Q6PI47 426 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 KRT74Q7RTS7 529 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 GRINAQ7Z429 371 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CISD2Q8N5K1 135 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 LRRC17Q8N6Y2 441 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF676Q8N7Q3 588 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 NPEPL1Q8NDH3 523 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 PLPP5Q8NEB5 264 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 DUSP18Q8NEJ0 188 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 OR4M1Q8NGD0 313 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 OR1N1Q8NGS0 311 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 OR6N2Q8NGY6 317 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 OR6S1Q8NH40 331 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 OR1L3Q8NH93 324 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 GRPEL2Q8TAA5 225 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF721Q8TF20 911 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 THAP3Q8WTV1 239 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 RAB40AQ8WXH6 277 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 DNASE2BQ8WZ79 361 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC7A6Q92536 515 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 NSMAFQ92636 917 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 NAT6Q93015 286 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 TSLPQ969D9 159 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 RASD2Q96D21 266 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 OMA1Q96E52 524 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 PELI1Q96FA3 418 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 S100A16Q96FQ6 103 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 PGLYRP3Q96LB9 341 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 Q96M85 177 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 LMF1Q96S06 567 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SOSTQ9BQB4 213 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 NUDT9Q9BW91 350 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 NMNAT2Q9BZQ4 307 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ENKD1Q9H0I2 346 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ABCG5Q9H222 651 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 MMP28Q9H239 520 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF768Q9H5H4 540 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 PPP1R3EQ9H7J1 279 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 WDR76Q9H967 626 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 MARCH7Q9H992 704 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SERINC1Q9NRX5 453 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 FGF21Q9NSA1 209 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ACOXLQ9NUZ1 547 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 EMC3Q9P0I2 261 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 DHCR7Q9UBM7 475 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 RARRES3Q9UL19 164 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SPATA2Q9UM82 520 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CAMK2AQ9UQM7 478 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ADAM18Q9Y3Q7 739 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 NUBP2Q9Y5Y2 271 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CACNG2Q9Y698 323 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 CACNA1GO43497 2377 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 SCN3AQ9NY46 2000 aa5.31□□□□□ -1.56
ATPAF1-204ENST00000474020 ATG2BQ96BY7 2078 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 DOCK9Q9BZ29 2069 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 IGKV1D-42A0A075B6H8 117 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 TMED7-TICAM2A0A0A6YYA0 188 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 A0A0G2JMP0 313 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 A0A0X1KG70 313 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 OR6C68A6NDL8 312 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 OR6C70A6NIJ9 312 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SHISA7A6NL88 538 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ANXA2P2A6NMY6 339 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 E9PI62 339 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NPIPA5E9PKD4 350 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 AIPO00170 330 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 CTDSPLO15194 276 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 EEF1E1O43324 174 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SULT1B1O43704 296 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SCO2O43819 266 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 SNAPC5O75971 98 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 LDOC1O95751 146 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 DDAH2O95865 285 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 CLPSP04118 112 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 IGKV3-11P04433 115 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 CD2P06729 351 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 EIF4EP06730 217 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ANXA2P07355 339 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ANKRD34CP0C6C1 535 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 ASAH2BP0C7U1 165 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 CALCBP10092 127 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NR2C1P13056 603 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 NAGAP17050 411 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 C4BPBP20851 252 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 AHCYP23526 432 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 STOMP27105 288 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 UQCRC1P31930 480 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 EVI2BP34910 448 aa5.3□□□□□ -1.56
ATPAF1-204ENST00000474020 DHPSP49366 369 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms