RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 OR2AG1Q9H205 316 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MTIF3Q9H2K0 278 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TCEAL2Q9H3H9 227 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CLMPQ9H6B4 373 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DCLRE1BQ9H816 532 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 COQ10BQ9H8M1 238 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 COPS7BQ9H9Q2 264 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NANOGQ9H9S0 305 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NTN4Q9HB63 628 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PARVBQ9HBI1 364 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LRTM1Q9HBL6 345 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SGK2Q9HBY8 427 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ZFP14Q9HCL3 533 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 AGPAT4Q9NRZ5 378 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DNAJC11Q9NVH1 559 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NKIRAS2Q9NYR9 191 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 UBAP1Q9NZ09 502 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ADA2Q9NZK5 511 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 VAPAQ9P0L0 249 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C6orf203Q9P0P8 240 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ACTR3BQ9P1U1 418 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C5AR2Q9P296 337 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DEC1Q9P2X7 70 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 EPS15L1Q9UBC2 864 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LEF1Q9UJU2 399 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ANAPC2Q9UJX6 822 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ANGPTL2Q9UKU9 493 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CDH7Q9ULB5 785 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF490Q9ULM2 529 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TMCO1Q9UM00 188 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 KCNK6Q9Y257 313 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC22A14Q9Y267 594 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NDUFAF1Q9Y375 327 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TMED3Q9Y3Q3 217 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LRRC42Q9Y546 428 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR1A2Q9Y585 309 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 AP4B1Q9Y6B7 739 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MTCH2Q9Y6C9 303 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 R4GN57 208 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ANKRD17O75179 2603 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ABCA2Q9BZC7 2435 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CACNA1BQ00975 2339 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH6Q9C0G6 4158 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH10Q8IVF4 4471 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 POLQO75417 2590 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RAI1Q7Z5J4 1906 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HUWE1Q7Z6Z7 4374 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MYO9AB2RTY4 2548 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 A0A0A6YYD5 115 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 A0A0G2JN53 185 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RNF103-CHMP3A0A140T963 221 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 A0A1W2PPK0 400 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TRBC2A0A5B9 178 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SYNDIG1LA6NDD5 238 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MGAT4DA6NG13 374 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 URADA6NGE7 173 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM64CA6NLI5 447 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 H0YIV9 168 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 K7EQD1 137 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 M0R129 80 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SLC28A1O00337 649 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 BTN3A3O00478 584 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CXCR6O00574 342 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PLPP1O14494 284 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 EI24O14681 340 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LIN7AO14910 233 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PFDN6O15212 129 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CASC3O15234 703 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MBTPS2O43462 519 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 B4GAT1O43505 415 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HCRTR1O43613 425 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 VEGFDO43915 354 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LCMT2O60294 686 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 NME6O75414 186 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 GCM2O75603 506 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 POP7O75817 140 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DIRAS1O95057 198 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 KLF8O95600 359 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CPSF4O95639 269 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SNAP29O95721 258 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CLIC3O95833 236 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 C6orf47O95873 294 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 EPPINO95925 133 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SERPINA1P01009 418 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IGHV2-70P01814 119 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CATP04040 527 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IGHV4-34P06331 123 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LYNP07948 512 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IL3P08700 152 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HTR1AP08908 422 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ADRA2AP08913 450 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 GNAO1P09471 354 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RAB40ALP0C0E4 278 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SLC35G4P0C7Q5 338 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ZCCHC18P0CG32 403 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LAMP1P11279 417 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 UQCRBP14927 111 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ETS2P15036 469 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms