RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PPP1R36Q96LQ0 422 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 C9orf72Q96LT7 481 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 OMDQ99983 421 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 CHRDL1Q9BU40 450 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 TM6SF2Q9BZW4 377 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 MAGT1Q9H0U3 335 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 VCXQ9H320 206 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 TMEM231Q9H6L2 316 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 ACTR8Q9H981 624 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 ZNF160Q9HCG1 818 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 DIABLOQ9NR28 239 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 C20orf96Q9NUD7 363 aaPredicted RBP2.59□□□□□ -1.99
CD46-213ENST00000471987 CD274Q9NZQ7 290 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 RNF14Q9UBS8 474 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 SEC14L3Q9UDX4 400 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 ENOPH1Q9UHY7 261 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 FOXA2Q9Y261 457 aaPredicted RBP2.59□□□□□ -1.99
CD46-213ENST00000471987 RASD1Q9Y272 281 aa2.59□□□□□ -1.99
CD46-213ENST00000471987 PBRM1Q86U86 1689 aa2.59□□□□□ -2
CD46-213ENST00000471987 ABCC11Q96J66 1382 aa2.59□□□□□ -2
CD46-213ENST00000471987 TRAV26-1A0A087WT03 109 aa2.58□□□□□ -2
CD46-213ENST00000471987 TRBV6-6A0A0A6YYG2 114 aa2.58□□□□□ -2
CD46-213ENST00000471987 GNG14A0A1W2PPG7 69 aa2.58□□□□□ -2
CD46-213ENST00000471987 LRIT2A6NDA9 550 aa2.58□□□□□ -2
CD46-213ENST00000471987 C9JVG2 144 aa2.58□□□□□ -2
CD46-213ENST00000471987 BCKDKO14874 412 aa2.58□□□□□ -2
CD46-213ENST00000471987 ARPC1BO15143 372 aaKnown RBP2.58□□□□□ -2
CD46-213ENST00000471987 ARPC3O15145 178 aa2.58□□□□□ -2
CD46-213ENST00000471987 TOX3O15405 576 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 DUX1O43812 170 aa2.58□□□□□ -2
CD46-213ENST00000471987 NOS1APO75052 506 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 SDC3O75056 442 aa2.58□□□□□ -2
CD46-213ENST00000471987 ICOSLGO75144 302 aa2.58□□□□□ -2
CD46-213ENST00000471987 UPK3AO75631 287 aa2.58□□□□□ -2
CD46-213ENST00000471987 IGSF6O95976 241 aa2.58□□□□□ -2
CD46-213ENST00000471987 CRYGBP07316 175 aa2.58□□□□□ -2
CD46-213ENST00000471987 HIST1H2AGP0C0S8 130 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 HNF1AP20823 631 aa2.58□□□□□ -2
CD46-213ENST00000471987 G0S2P27469 103 aa2.58□□□□□ -2
CD46-213ENST00000471987 HSD11B1P28845 292 aa2.58□□□□□ -2
CD46-213ENST00000471987 OTX1P32242 354 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 ADRA1AP35348 466 aa2.58□□□□□ -2
CD46-213ENST00000471987 ARRB1P49407 418 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 STK19P49842 368 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 PPT1P50897 306 aa2.58□□□□□ -2
CD46-213ENST00000471987 AP1S2P56377 157 aa2.58□□□□□ -2
CD46-213ENST00000471987 SELPLGQ14242 412 aa2.58□□□□□ -2
CD46-213ENST00000471987 TGFBIQ15582 683 aa2.58□□□□□ -2
CD46-213ENST00000471987 ZNF630Q2M218 657 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 NDUFAF6Q330K2 333 aa2.58□□□□□ -2
CD46-213ENST00000471987 CHRFAM7AQ494W8 412 aa2.58□□□□□ -2
CD46-213ENST00000471987 ACTBL2Q562R1 376 aa2.58□□□□□ -2
CD46-213ENST00000471987 BEND3Q5T5X7 828 aa2.58□□□□□ -2
CD46-213ENST00000471987 LIPNQ5VXI9 398 aa2.58□□□□□ -2
CD46-213ENST00000471987 ZNF57Q68EA5 555 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 HIST2H2AA3Q6FI13 130 aa2.58□□□□□ -2
CD46-213ENST00000471987 SPOPLQ6IQ16 392 aa2.58□□□□□ -2
CD46-213ENST00000471987 LRRC8BQ6P9F7 803 aa2.58□□□□□ -2
CD46-213ENST00000471987 CXCL17Q6UXB2 119 aa2.58□□□□□ -2
CD46-213ENST00000471987 B3GLCTQ6Y288 498 aa2.58□□□□□ -2
CD46-213ENST00000471987 IDO2Q6ZQW0 420 aa2.58□□□□□ -2
CD46-213ENST00000471987 TMEM26Q6ZUK4 368 aa2.58□□□□□ -2
CD46-213ENST00000471987 Q7L0L9 218 aa2.58□□□□□ -2
CD46-213ENST00000471987 SSX9Q7RTT3 188 aa2.58□□□□□ -2
CD46-213ENST00000471987 PID1Q7Z2X4 250 aa2.58□□□□□ -2
CD46-213ENST00000471987 SMIM15Q7Z3B0 74 aa2.58□□□□□ -2
CD46-213ENST00000471987 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 GTPBP8Q8N3Z3 284 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 ALLCQ8N6M5 410 aa2.58□□□□□ -2
CD46-213ENST00000471987 NATD1Q8N6N6 113 aa2.58□□□□□ -2
CD46-213ENST00000471987 LRRC17Q8N6Y2 441 aa2.58□□□□□ -2
CD46-213ENST00000471987 COLGALT1Q8NBJ5 622 aa2.58□□□□□ -2
CD46-213ENST00000471987 OR5T3Q8NGG3 340 aa2.58□□□□□ -2
CD46-213ENST00000471987 OR5D18Q8NGL1 313 aa2.58□□□□□ -2
CD46-213ENST00000471987 OR52N1Q8NH53 320 aa2.58□□□□□ -2
CD46-213ENST00000471987 DCUN1D4Q92564 292 aa2.58□□□□□ -2
CD46-213ENST00000471987 GTF2H4Q92759 462 aa2.58□□□□□ -2
CD46-213ENST00000471987 HIST1H2ACQ93077 130 aa2.58□□□□□ -2
CD46-213ENST00000471987 MYDGFQ969H8 173 aa2.58□□□□□ -2
CD46-213ENST00000471987 ECHDC3Q96DC8 303 aa2.58□□□□□ -2
CD46-213ENST00000471987 TGS1Q96RS0 853 aaKnown RBP2.58□□□□□ -2
CD46-213ENST00000471987 NPAS2Q99743 824 aa2.58□□□□□ -2
CD46-213ENST00000471987 C7orf50Q9BRJ6 194 aaKnown RBP2.58□□□□□ -2
CD46-213ENST00000471987 HINT2Q9BX68 163 aa2.58□□□□□ -2
CD46-213ENST00000471987 ZSCAN16Q9H4T2 348 aaPredicted RBP2.58□□□□□ -2
CD46-213ENST00000471987 ASCL3Q9NQ33 180 aa2.58□□□□□ -2
CD46-213ENST00000471987 NECAP2Q9NVZ3 263 aa2.58□□□□□ -2
CD46-213ENST00000471987 CMTM6Q9NX76 183 aa2.58□□□□□ -2
CD46-213ENST00000471987 SLC2A8Q9NY64 477 aa2.58□□□□□ -2
CD46-213ENST00000471987 AHSPQ9NZD4 102 aa2.58□□□□□ -2
CD46-213ENST00000471987 MTCH1Q9NZJ7 389 aa2.58□□□□□ -2
CD46-213ENST00000471987 SLC17A7Q9P2U7 560 aa2.58□□□□□ -2
CD46-213ENST00000471987 ERVW-1Q9UQF0 538 aa2.58□□□□□ -2
CD46-213ENST00000471987 RBMX2Q9Y388 322 aaKnown RBP2.58□□□□□ -2
CD46-213ENST00000471987 NPTNQ9Y639 398 aa2.58□□□□□ -2
CD46-213ENST00000471987 MTUS2Q5JR59 1369 aa2.58□□□□□ -2
CD46-213ENST00000471987 NUP160Q12769 1436 aa2.58□□□□□ -2
CD46-213ENST00000471987 ADGRL3Q9HAR2 1447 aa2.58□□□□□ -2
CD46-213ENST00000471987 CEP350Q5VT06 3117 aa2.57□□□□□ -2
CD46-213ENST00000471987 THOC2Q8NI27 1593 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms