RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 S1PR5Q9H228 398 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 ERRFI1Q9UJM3 462 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 AMMECR1Q9Y4X0 333 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 TBX10O75333 385 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 RAB3DO95716 219 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 HOXD11P31277 338 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 TRHRP34981 398 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 TNFAIP6P98066 277 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 ACER2Q5QJU3 275 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 ZNF626Q68DY1 528 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 BLOC1S3Q6QNY0 202 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 OR13C9Q8NGT0 318 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 DDX31Q9H8H2 851 aaKnown RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 PRDM6Q9NQX0 595 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 TRABD2BA6NFA1 517 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 ZNF705EA8MWA4 302 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 GPR37O15354 613 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 MT-ATP6P00846 226 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 CNR1P21554 472 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 TUBA1BP68363 451 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 TUBA4AP68366 448 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 PLK5Q496M5 336 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 FAM69AQ5T7M9 428 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 PRAMEF5Q5TYX0 476 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 PRAMEF6Q5VXH4 476 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 SFRP4Q6FHJ7 346 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 USP51Q70EK9 711 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 TUBA1AQ71U36 451 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 CXorf67Q86X51 503 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 LILRA3Q8N6C8 439 aaPredicted RBP7.86□□□□□ -1.15
CD47-204ENST00000471694 FAM71CQ8NEG0 241 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 LKAAEAR1Q8TD35 194 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 LOXL4Q96JB6 756 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 UHRF2Q96PU4 802 aa7.86□□□□□ -1.15
CD47-204ENST00000471694 SRRM3A6NNA2 597 aaPredicted RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 CALCBP10092 127 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 NAAAQ02083 359 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SPHARQ15513 63 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ZNF628Q5EBL2 1059 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SPINK14Q6IE38 97 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ZNF573Q86YE8 665 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GGHQ92820 318 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 NDFIP1Q9BT67 221 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ABHD6Q9BV23 337 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SCO1O75880 301 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 IGFBP1P08833 259 aaPredicted RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 NDUFA6P56556 154 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SLC48A1Q6P1K1 146 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 TSEN54Q7Z6J9 526 aaKnown RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 ADGRG5Q8IZF4 528 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 CA13Q8N1Q1 262 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 MAFIPQ8WZ33 124 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 REEP6Q96HR9 211 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 OR14A2Q96R54 314 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GSTO2Q9H4Y5 243 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 COA3Q9Y2R0 106 aaPredicted RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 KRBA1A5PL33 1030 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 LYZL6O75951 148 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ERHP84090 104 aaKnown RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 ARHGAP11BQ3KRB8 267 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GTDC1Q4AE62 458 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ABHD17CQ6PCB6 329 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 TUBA3EQ6PEY2 450 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 OR51D1Q8NGF3 324 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 FRZBQ92765 325 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 WDR76Q9H967 626 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 PCDHGA9Q9Y5G4 932 aaKnown RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 ANKRD36CQ5JPF3 1778 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 DDX60Q8IY21 1712 aaKnown RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 LINC01387J3KSC0 135 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 BHLHE40O14503 412 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 DHRS4L1P0CG22 281 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SPINK2P20155 84 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 NXPH1P58417 271 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 RAP2BP61225 183 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ACSM5Q6NUN0 579 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 MFSD12Q6NUT3 480 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SMRP1Q8NCR6 262 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 OR56B1Q8NGI3 324 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 TM4SF18Q96CE8 201 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 OXGR1Q96P68 337 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 PIMREGQ9BSJ6 248 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ZNF225Q9UK10 706 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 MOKQ9UQ07 419 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SCN11AQ9UI33 1791 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 TRAF3IP2O43734 574 aaPredicted RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 FOLR1P15328 257 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GMPRP36959 345 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GNG10P50151 68 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 SNTB2Q13425 540 aaKnown RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 AGERQ15109 404 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GSG1Q2KHT4 349 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 GTF2H4Q92759 462 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 YTHDF1Q9BYJ9 559 aaKnown RBP7.85□□□□□ -1.15
CD47-204ENST00000471694 ACOT13Q9NPJ3 140 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 OCIAD1Q9NX40 245 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 PPP1R3CQ9UQK1 317 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 ATG4BQ9Y4P1 393 aa7.85□□□□□ -1.15
CD47-204ENST00000471694 PENKP01210 267 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms