RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 THRBP10828 461 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 KRT4P19013 534 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 S100A3P33764 101 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 CLRN1P58418 232 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 NCALDP61601 193 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 EGR4Q05215 589 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 PAX8Q06710 450 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 EGR3Q06889 387 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 PUDPQ08623 228 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 PCLAFQ15004 111 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 TAF11Q15544 211 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 MS4A18Q3C1V0 323 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 UGT3A2Q3SY77 523 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 OXLD1Q5BKU9 147 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 XKR7Q5GH72 579 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 SPANXN4Q5MJ08 99 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 DHRS7BQ6IAN0 325 aaPredicted RBP5.77□□□□□ -1.49
HDAC1-204ENST00000471488 CCBE1Q6UXH8 406 aaPredicted RBP5.77□□□□□ -1.49
HDAC1-204ENST00000471488 Q6YL49 198 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 REC114Q7Z4M0 266 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 RIMKLAQ8IXN7 391 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 LYG1Q8N1E2 194 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 BHLHE22Q8NFJ8 381 aaPredicted RBP5.77□□□□□ -1.49
HDAC1-204ENST00000471488 SLC25A40Q8TBP6 338 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 THOC1Q96FV9 657 aaKnown RBP5.77□□□□□ -1.49
HDAC1-204ENST00000471488 ARHGDIGQ99819 225 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 NUDT16L1Q9BRJ7 211 aaKnown RBP5.77□□□□□ -1.49
HDAC1-204ENST00000471488 SLC19A3Q9BZV2 496 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 C1orf198Q9H425 327 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 TOR3AQ9H497 397 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 MEAF6Q9HAF1 191 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 GLTPQ9NZD2 209 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 P2RX2Q9UBL9 471 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 IL20RAQ9UHF4 553 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 PYCARDQ9ULZ3 195 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 PPP1R3CQ9UQK1 317 aa5.77□□□□□ -1.49
HDAC1-204ENST00000471488 A0A087WUJ7 227 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 CEACAM18A8MTB9 384 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 H0YL77 283 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 RIPK2O43353 540 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 RNF13O43567 381 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 PLATP00750 562 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 SFTPBP07988 381 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 GUSBP08236 651 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 QDPRP09417 244 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 UMPSP11172 480 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ETFAP13804 333 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 TNFRSF1AP19438 455 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 RPS4Y1P22090 263 aaKnown RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 STOMP27105 288 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ALDH3A1P30838 453 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ARRB2P32121 409 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 MDH2P40926 338 aaKnown RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 CDKN2CP42773 168 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 GDI2P50395 445 aaKnown RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 MMP15P51511 669 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF84P51523 738 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 CRISP3P54108 245 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 EMX2Q04743 252 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 BST1Q10588 318 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ZMAT1Q5H9K5 638 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ALG10BQ5I7T1 473 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 PABPC1L2AQ5JQF8 200 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 SLC27A4Q6P1M0 643 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 Q6ZTK2 550 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 C9orf139Q6ZV77 190 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 KLBQ86Z14 1044 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF101Q8IZC7 436 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 MUC20Q8N307 709 aaPredicted RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 POU5F2Q8N7G0 328 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ATG16L2Q8NAA4 619 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 AKR7LQ8NHP1 331 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF420Q8TAQ5 688 aaPredicted RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 KLF14Q8TD94 323 aaPredicted RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ITLN1Q8WWA0 313 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 SSMEM1Q8WWF3 244 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 RAB40AQ8WXH6 277 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 DYRK2Q92630 601 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF566Q969W8 418 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 UPRTQ96BW1 309 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 MARS2Q96GW9 593 aaKnown RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 PLEKHA8Q96JA3 519 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 FAM71F1Q96KD3 344 aaPredicted RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 LRR1Q96L50 414 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 TECTBQ96PL2 329 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 MMADHCQ9H3L0 296 aaPredicted RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 NOX4Q9NPH5 578 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 CYSLTR2Q9NS75 346 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM38BQ9NVV0 291 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 AURKAIP1Q9NWT8 199 aaPredicted RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ZDHHC8Q9ULC8 765 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 LRCH1Q9Y2L9 728 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 GPR45Q9Y5Y3 372 aa5.76□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF816-ZNF321PA0A0X1KG74 233 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 A0A1B0GWA3 101 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 TLDC2A0PJX2 215 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 C5orf63A6NC05 138 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 BTBD17A6NE02 478 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 ANKRD61A6NGH8 418 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms