RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CNRIP1Q96F85 164 aaPredicted RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 CMTM7Q96FZ5 175 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 AURKBQ96GD4 344 aaPredicted RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 FCRL1Q96LA6 429 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 RILPQ96NA2 401 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 SERPINI1Q99574 410 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 NPAS2Q99743 824 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 TRIM4Q9C037 500 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 IKZF5Q9H5V7 419 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 NT5DC2Q9H857 520 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 EML4Q9HC35 981 aaKnown RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 SAR1AQ9NR31 198 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 AIG1Q9NVV5 245 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 C1orf109Q9NX04 203 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 CCDC167Q9P0B6 97 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 TRPC4Q9UBN4 977 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 VPS29Q9UBQ0 182 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 MED12Q93074 2177 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ACACAQ13085 2346 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 URB1O60287 2271 aaKnown RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 CACNA1GO43497 2377 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 TRBV4-1A0A0J9YWV2 114 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 LOC100653049A0A140TA62 436 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 A0A1B0GX78 115 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ERICH4A6NGS2 130 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 GABRR3A8MPY1 467 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 K7EM74 188 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FOXE1O00358 373 aaPredicted RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 NDUFAB1O14561 156 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 SCAMP2O15127 329 aaKnown RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 UBDO15205 165 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 RAD1O60671 282 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 KLF7O75840 302 aaPredicted RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 KRT34O76011 436 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 CPSF4O95639 269 aaKnown RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 C6orf47O95873 294 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 AADACP22760 399 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 CPN2P22792 545 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 CXCR2P25025 360 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 AZGP1P25311 298 aaKnown RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 DLSTP36957 453 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 MTTPP55157 894 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ERVK-8P63133 956 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 TNFRSF17Q02223 184 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ACY1Q03154 408 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FOLH1Q04609 750 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 PAX8Q06710 450 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ASPHQ12797 758 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 NCF4Q15080 339 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF239Q16600 458 aaKnown RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FAM174BQ3ZCQ3 159 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 VPS26BQ4G0F5 336 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 TCTEX1D4Q5JR98 221 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 DCAF12Q5T6F0 453 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 HIST2H2AA3Q6FI13 130 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FAM71E1Q6IPT2 247 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 RHBDD2Q6NTF9 364 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 TRIM40Q6P9F5 258 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 TMEM107Q6UX40 140 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 RIMKLAQ8IXN7 391 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 Q8N377 158 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 TTC29Q8NA56 475 aaPredicted RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 AQP11Q8NBQ7 271 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 TRPV3Q8NET8 790 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 OR4D10Q8NGI6 311 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 WDR36Q8NI36 951 aaKnown RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 RAB3IL1Q8TBN0 382 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FAM110BQ8TC76 370 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 MIPOL1Q8TD10 442 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 RCN3Q96D15 328 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ERP27Q96DN0 273 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 C16orf58Q96GQ5 468 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 C2orf48Q96LS8 159 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF681Q96N22 645 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FOXN4Q96NZ1 517 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 BTBD9Q96Q07 612 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 SERINC2Q96SA4 455 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 KLHDC3Q9BQ90 382 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 SOSTQ9BQB4 213 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 RSPO3Q9BXY4 272 aaPredicted RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 STRADBQ9C0K7 418 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 SLC7A5P2Q9GIP4 190 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 GLIPR2Q9H4G4 154 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 COPS7BQ9H9Q2 264 aaPredicted RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ANKHQ9HCJ1 492 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 FBXO8Q9NRD0 319 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF223Q9UK11 482 aaPredicted RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 CES1P1Q9UKY3 287 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 SLC22A7Q9Y694 548 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 KCNE3Q9Y6H6 103 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 PTPRQQ9UMZ3 2332 aa3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ANKRD11Q6UB99 2663 aaPredicted RBP3.32□□□□□ -1.88
COL9A1-206ENST00000470652 ITPR1Q14643 2758 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CNTRLQ7Z7A1 2325 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 HEATR5AQ86XA9 2040 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 NPIPA5A0A0B4J1W7 369 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 A0A1W2PPR1 153 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 VSTM2BA6NLU5 285 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms