RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 BARX1Q9HBU1 254 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 MEPEQ9NQ76 525 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 POT1Q9NUX5 634 aa8.71□□□□□ -1.02
HDAC3-205ENST00000469550 APOBEC3BQ9UH17 382 aaKnown RBP8.71□□□□□ -1.02
HDAC3-205ENST00000469550 XRCC3O43542 346 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 KDM4BO94953 1096 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 RLN2P04090 185 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 FCER2P06734 321 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 SLC35G4P0C7Q5 338 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 MST1P26927 711 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 CERS1P27544 350 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 RORAP35398 523 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 DIO1P49895 249 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 SSBP1Q04837 148 aaKnown RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 FHL1Q13642 323 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PON3Q15166 354 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 IRF4Q15306 451 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 LTB4RQ15722 352 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 GPR68Q15743 365 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 DUSP5Q16690 384 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 C2orf68Q2NKX9 166 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 MRPL2Q5T653 305 aaKnown RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 FCRLBQ6BAA4 426 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 SERPINA12Q8IW75 414 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 CCDC36Q8IYA8 594 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 DND1Q8IYX4 353 aaKnown RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 MUC20Q8N307 709 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 LRRC25Q8N386 305 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 MFSD9Q8NBP5 474 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 OR52B4Q8NGK2 314 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 OR10K1Q8NGX5 313 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 OR51A7Q8NH64 312 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 LMX1AQ8TE12 382 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 ST8SIA2Q92186 375 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 TNFRSF13CQ96RJ3 184 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PDCD1LG2Q9BQ51 273 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF559Q9BR84 538 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 C1orf198Q9H425 327 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 TMEM27Q9HBJ8 222 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PRDM9Q9NQV7 894 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 CHRNA9Q9UGM1 479 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 GNG8Q9UK08 70 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PRKAB1Q9Y478 270 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 CELSR3Q9NYQ7 3312 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 HELZ2Q9BYK8 2649 aaKnown RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 RP1P56715 2156 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 TRAV27A0A087WT01 109 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 GXYLT2A0PJZ3 443 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PCP4L1A6NKN8 68 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 FAM74A7A6NL05 159 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 OR5K4A6NMS3 321 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 TEX46H3BTG2 121 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 H7C2Y5 167 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 NTN3O00634 580 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 GOSR2O14653 212 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PRICKLE3O43900 615 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PLATP00750 562 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 GYPBP06028 91 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PTNP21246 168 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 CFPP27918 469 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 HCCSP53701 268 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 SRSF4Q08170 494 aaKnown RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF345Q14585 488 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 DEFB133Q30KQ1 61 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 FAM74A3Q4VXF1 159 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 SLC6A19Q695T7 634 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 FAAP20Q6NZ36 180 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 PAQR7Q86WK9 346 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF433Q8N7K0 673 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 C7orf57Q8NEG2 295 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 OR52E2Q8NGJ4 325 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 ZMYND19Q96E35 227 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 LIN37Q96GY3 246 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 FERD3LQ96RJ6 166 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 SCPEP1Q9HB40 452 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 MRPS30Q9NP92 439 aaKnown RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 MYOZ1Q9NP98 299 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 SLC39A1Q9NY26 324 aa8.7□□□□□ -1.02
HDAC3-205ENST00000469550 ZMAT5Q9UDW3 170 aaKnown RBP8.7□□□□□ -1.02
HDAC3-205ENST00000469550 CCDC187A0A096LP49 1063 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 ARPC4-TTLL3A0A0A6YYG9 625 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 A0A0B4J2E0 115 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 CENPVL1A0A0U1RR11 272 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 A0A1B0GX12 115 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 PQLC2LA1A4F0 135 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 CPED1A4D0V7 1026 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 ACOD1A6NK06 481 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 GPR89AB7ZAQ6 455 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 MAGEB4O15481 346 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF254O75437 659 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 NDUFB2O95178 105 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 SPDEFO95238 335 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 SIX6O95475 246 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 CBX7O95931 251 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 AK1P00568 194 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 IGF2P01344 180 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 CD8AP01732 235 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 GKN3PP0CG01 181 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 GPR89BP0CG08 455 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 CNR1P21554 472 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms