RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 FAM214BQ7L5A3 538 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 TUSC5Q8IXB3 177 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 LRRC75AQ8NAA5 344 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 RND1Q92730 232 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 NRIP3Q9NQ35 241 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 PARPBPQ9NWS1 579 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 RPL36Q9Y3U8 105 aaKnown RBP13.11□□□□□ -0.31
DDX56-208ENST00000467318 UGT2A1Q9Y4X1 527 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 PEX16Q9Y5Y5 336 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 ARHGAP21Q5T5U3 1957 aa13.11□□□□□ -0.31
DDX56-208ENST00000467318 PNMA8CA0A1B0GUJ8 204 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 HSPB2A8KAH6 182 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 AKAP8O43823 692 aaKnown RBP13.1□□□□□ -0.31
DDX56-208ENST00000467318 TP53P04637 393 aaPredicted RBP13.1□□□□□ -0.31
DDX56-208ENST00000467318 BMP4P12644 408 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 HLA-DOBP13765 273 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
DDX56-208ENST00000467318 GADD45AP24522 165 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 UQCRFS1P47985 274 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 RGS6P49758 472 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
DDX56-208ENST00000467318 GUSBP1Q15486 140 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 HSPB2Q16082 182 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 ZNF181Q2M3W8 571 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 TMEM236Q5W0B7 351 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 MTFR2Q6P444 385 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 NHLRC1Q6VVB1 395 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 HDDC2Q7Z4H3 204 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 KIF18BQ86Y91 864 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 TMEM45BQ96B21 275 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 INTS12Q96CB8 462 aaKnown RBP13.1□□□□□ -0.31
DDX56-208ENST00000467318 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 EGLN3Q9H6Z9 239 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 SLC25A19Q9HC21 320 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 NOSIPQ9Y314 301 aaKnown RBP13.1□□□□□ -0.31
DDX56-208ENST00000467318 EMC9Q9Y3B6 208 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 PMF1-BGLAPU3KQ54 211 aa13.1□□□□□ -0.31
DDX56-208ENST00000467318 MED12LQ86YW9 2145 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 DOCK7Q96N67 2140 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 MCIDASD6RGH6 385 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 TRAF3IP2O43734 574 aaPredicted RBP13.09□□□□□ -0.31
DDX56-208ENST00000467318 IDH3BO43837 385 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 SOX14O95416 240 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 IGHMP01871 453 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 TMIGD3P0DMS9 266 aaPredicted RBP13.09□□□□□ -0.31
DDX56-208ENST00000467318 AGTR1P30556 359 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 SLC15A1P46059 708 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 OCLNQ16625 522 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 C12orf73Q69YU5 71 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 SLC35D2Q76EJ3 337 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 ZBTB46Q86UZ6 589 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 GCNT2Q8N0V5 402 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 ZIC4Q8N9L1 334 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 OR2T33Q8NG76 320 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 OR8J1Q8NGP2 316 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
DDX56-208ENST00000467318 ZNF385AQ96PM9 386 aaKnown RBP13.09□□□□□ -0.31
DDX56-208ENST00000467318 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 ENKD1Q9H0I2 346 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 AMBNQ9NP70 447 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 CHCHD3Q9NX63 227 aaKnown RBP13.09□□□□□ -0.31
DDX56-208ENST00000467318 GRHPRQ9UBQ7 328 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 ZNF629Q9UEG4 869 aaPredicted RBP13.09□□□□□ -0.31
DDX56-208ENST00000467318 IL20RAQ9UHF4 553 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 CLEC4AQ9UMR7 237 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 RCE1Q9Y256 329 aa13.09□□□□□ -0.31
DDX56-208ENST00000467318 CCRL2O00421 344 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 ARPC3O15145 178 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 MRPL33O75394 65 aaKnown RBP13.08□□□□□ -0.31
DDX56-208ENST00000467318 SERPINI2O75830 405 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 IL18BPO95998 194 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 IFNGR1P15260 489 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 CTSSP25774 331 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 POU1F1P28069 291 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 SDHAP31040 664 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 GIPRP48546 466 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 NUDT6P53370 316 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 RPL27P61353 136 aaKnown RBP13.08□□□□□ -0.31
DDX56-208ENST00000467318 ACKR1Q16570 336 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 SLC25A30Q5SVS4 291 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 FAM205BPQ63HN1 556 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 GPR139Q6DWJ6 353 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 SLC27A4Q6P1M0 643 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 FJX1Q86VR8 437 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 OR6K3Q8NGY3 331 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 RPL3LQ92901 407 aaKnown RBP13.08□□□□□ -0.31
DDX56-208ENST00000467318 TMEM80Q96HE8 168 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 FAM210AQ96ND0 272 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 MGLLQ99685 303 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 IFT27Q9BW83 186 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.31
DDX56-208ENST00000467318 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms