RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TMEM249Q2WGJ8 235 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 C10orf128Q5T292 105 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 PIGWQ7Z7B1 504 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 PAQR4Q8N4S7 273 aaPredicted RBP18.77■□□□□ 0.6
LIME1-203ENST00000465591 FAM86B1Q8N7N1 296 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 FAM156AQ8NDB6 213 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 OR13C2Q8NGS9 318 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 OR51A7Q8NH64 312 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 TNFRSF13CQ96RJ3 184 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 CCT8L2Q96SF2 557 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 KCNK17Q96T54 332 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 MRPL37Q9BZE1 423 aaKnown RBP18.77■□□□□ 0.6
LIME1-203ENST00000465591 ZNF346Q9UL40 294 aaKnown RBP18.77■□□□□ 0.6
LIME1-203ENST00000465591 FKBP7Q9Y680 259 aa18.77■□□□□ 0.6
LIME1-203ENST00000465591 SAGP10523 405 aaPredicted RBP18.76■□□□□ 0.59
LIME1-203ENST00000465591 IFNA8P32881 189 aa18.76■□□□□ 0.59
LIME1-203ENST00000465591 ACOT11Q8WXI4 607 aaPredicted RBP18.76■□□□□ 0.59
LIME1-203ENST00000465591 MRPL24Q96A35 216 aaKnown RBP18.76■□□□□ 0.59
LIME1-203ENST00000465591 SPAG4Q9NPE6 437 aa18.76■□□□□ 0.59
LIME1-203ENST00000465591 ARL2BPQ9Y2Y0 163 aa18.76■□□□□ 0.59
LIME1-203ENST00000465591 CMAHPQ9Y471 501 aa18.76■□□□□ 0.59
LIME1-203ENST00000465591 ENPP4Q9Y6X5 453 aa18.76■□□□□ 0.59
LIME1-203ENST00000465591 EFCAB9A8MZ26 197 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 NDUFAB1O14561 156 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 CDC42EP2O14613 210 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 FARS2O95363 451 aaKnown RBP18.75■□□□□ 0.59
LIME1-203ENST00000465591 FAM107AO95990 144 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 IGHMP01871 453 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 TP53P04637 393 aaPredicted RBP18.75■□□□□ 0.59
LIME1-203ENST00000465591 MMP7P09237 267 aaPredicted RBP18.75■□□□□ 0.59
LIME1-203ENST00000465591 CSF3P09919 207 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 CCL2P13500 99 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 ZNF26P17031 533 aaPredicted RBP18.75■□□□□ 0.59
LIME1-203ENST00000465591 GLRXP35754 106 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 GPR4P46093 362 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 PDLIM4P50479 330 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 ZNF84P51523 738 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 CTXN1P60606 82 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 GKAP1Q5VSY0 366 aaPredicted RBP18.75■□□□□ 0.59
LIME1-203ENST00000465591 GLYATQ6IB77 296 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 SLC25A47Q6Q0C1 308 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 ZNF730Q6ZMV8 503 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 MBOAT2Q6ZWT7 520 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 SLC16A14Q7RTX9 510 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 HDDC2Q7Z4H3 204 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 LRP11Q86VZ4 500 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 LRRC18Q8N456 261 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 NSMAFQ92636 917 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 NABP1Q96AH0 204 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 FOXN4Q96NZ1 517 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 TSPAN32Q96QS1 320 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 NMNAT1Q9HAN9 279 aaPredicted RBP18.75■□□□□ 0.59
LIME1-203ENST00000465591 YAE1D1Q9NRH1 226 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 ADA2Q9NZK5 511 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 MYEF2Q9P2K5 600 aaKnown RBP18.75■□□□□ 0.59
LIME1-203ENST00000465591 FZR1Q9UM11 496 aa18.75■□□□□ 0.59
LIME1-203ENST00000465591 HTR3EA5X5Y0 456 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 CRLF1O75462 422 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 RPL27P61353 136 aaKnown RBP18.74■□□□□ 0.59
LIME1-203ENST00000465591 CD47Q08722 323 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 CARTPTQ16568 116 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 NRN1LQ496H8 165 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 RNF113BQ8IZP6 322 aaKnown RBP18.74■□□□□ 0.59
LIME1-203ENST00000465591 ZNF519Q8TB69 540 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 SLC7A13Q8TCU3 470 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 C7orf34Q96L11 122 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 SYT3Q9BQG1 590 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 RNF121Q9H920 327 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 DCAF13Q9NV06 445 aaKnown RBP18.74■□□□□ 0.59
LIME1-203ENST00000465591 ARL8BQ9NVJ2 186 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 NDUFAF4Q9P032 175 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 FBXL3Q9UKT7 428 aa18.74■□□□□ 0.59
LIME1-203ENST00000465591 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.74■□□□□ 0.594e-7■■■■□ 21.5
LIME1-203ENST00000465591 KIAA1324LA8MWY0 1029 aaPredicted RBP18.73■□□□□ 0.59
LIME1-203ENST00000465591 VSTM5A8MXK1 200 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 DIRAS1O95057 198 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 ADRA2AP08913 450 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 MRPS34P82930 218 aaKnown RBP18.73■□□□□ 0.59
LIME1-203ENST00000465591 VLDLRP98155 873 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 TMEM53Q6P2H8 277 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 PODNL1Q6PEZ8 512 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 OAFQ86UD1 273 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 SLC30A7Q8NEW0 376 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 RAB1BQ9H0U4 201 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 TPK1Q9H3S4 243 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 SMURF2Q9HAU4 748 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 DYNLRB1Q9NP97 96 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 STX18Q9P2W9 335 aaKnown RBP18.73■□□□□ 0.59
LIME1-203ENST00000465591 RPS6KA6Q9UK32 745 aa18.73■□□□□ 0.59
LIME1-203ENST00000465591 TLX2O43763 284 aaPredicted RBP18.72■□□□□ 0.59
LIME1-203ENST00000465591 ENTPD5O75356 428 aa18.72■□□□□ 0.59
LIME1-203ENST00000465591 DCTN3O75935 186 aa18.72■□□□□ 0.59
LIME1-203ENST00000465591 FAM157BP0CG42 384 aa18.72■□□□□ 0.59
LIME1-203ENST00000465591 TCN1P20061 433 aaPredicted RBP18.72■□□□□ 0.59
LIME1-203ENST00000465591 USF1P22415 310 aaPredicted RBP18.72■□□□□ 0.59
LIME1-203ENST00000465591 MSX2P35548 267 aaPredicted RBP18.72■□□□□ 0.59
LIME1-203ENST00000465591 NR4A2P43354 598 aa18.72■□□□□ 0.59
LIME1-203ENST00000465591 GALK2Q01415 458 aa18.72■□□□□ 0.59
LIME1-203ENST00000465591 GGTLC2Q14390 218 aa18.72■□□□□ 0.59
LIME1-203ENST00000465591 MAD2L1BPQ15013 274 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms