RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 OR51D1Q8NGF3 324 aa16.55■□□□□ 0.24
SYNE4-204ENST00000465425 MCHR2Q969V1 340 aa16.55■□□□□ 0.24
SYNE4-204ENST00000465425 OMA1Q96E52 524 aa16.55■□□□□ 0.24
SYNE4-204ENST00000465425 OR8B4Q96RC9 309 aa16.55■□□□□ 0.24
SYNE4-204ENST00000465425 WWTR1Q9GZV5 400 aa16.55■□□□□ 0.24
SYNE4-204ENST00000465425 NPDC1Q9NQX5 325 aaPredicted RBP16.55■□□□□ 0.24
SYNE4-204ENST00000465425 FBXL3Q9UKT7 428 aa16.55■□□□□ 0.24
SYNE4-204ENST00000465425 B9D1Q9UPM9 204 aa16.55■□□□□ 0.24
SYNE4-204ENST00000465425 LMO7DNF2Z398 122 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 SUSD5O60279 629 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 TSPAN2O60636 221 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 SLC16A7O60669 478 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ICMTO60725 284 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 NDUFB6O95139 128 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 SPARCP09486 303 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 IFNGR1P15260 489 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ANXA7P20073 488 aaKnown RBP16.54■□□□□ 0.24
SYNE4-204ENST00000465425 FBLP22087 321 aaKnown RBP16.54■□□□□ 0.24
SYNE4-204ENST00000465425 KIR3DL2P43630 455 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 SLC18B1Q6NT16 456 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 SEZ6L2Q6UXD5 910 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 MAMSTRQ6ZN01 415 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ZNF679Q8IYX0 411 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 MED30Q96HR3 178 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 TMA7Q9Y2S6 64 aaKnown RBP16.54■□□□□ 0.24
SYNE4-204ENST00000465425 PCDHGA5Q9Y5G8 931 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 METTL12A8MUP2 240 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ALDOBP05062 364 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ABCD3P28288 659 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 POLR2HP52434 150 aaKnown RBP16.54■□□□□ 0.24
SYNE4-204ENST00000465425 EPHA4P54764 986 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 PLA2G7Q13093 441 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 SLC17A1Q14916 467 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ANKRD16Q6P6B7 361 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 CCDC28AQ8IWP9 274 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ELMOD2Q8IZ81 293 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ATOH1Q92858 354 aaPredicted RBP16.54■□□□□ 0.24
SYNE4-204ENST00000465425 ZNF304Q9HCX3 659 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 TAS2R8Q9NYW2 309 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 UBQLN2Q9UHD9 624 aa16.54■□□□□ 0.24
SYNE4-204ENST00000465425 TMED7-TICAM2A0A0A6YYA0 188 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 GGT3PA6NGU5 568 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 H3BMH7 237 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 PSMA6P60900 246 aaKnown RBP16.53■□□□□ 0.24
SYNE4-204ENST00000465425 ADAM8P78325 824 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 DMWDQ09019 674 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 EXOSC2Q13868 293 aaKnown RBP16.53■□□□□ 0.24
SYNE4-204ENST00000465425 KRT77Q7Z794 578 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 SPICQ8N5J4 248 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 PTDSS2Q9BVG9 487 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 TMED7Q9Y3B3 224 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 LINC00862A6NCI5 91 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 H7C417 338 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 M0R233 179 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 TO15178 435 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 CTAG2O75638 210 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 CSF1P09603 554 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 POU3F4P49335 361 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 PNLIPRP2P54317 469 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 RBMS2Q15434 407 aaKnown RBP16.53■□□□□ 0.24
SYNE4-204ENST00000465425 ARHGAP40Q5TG30 622 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 FDX2Q6P4F2 183 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 KCTD18Q6PI47 426 aaPredicted RBP16.53■□□□□ 0.24
SYNE4-204ENST00000465425 OR1L3Q8NH93 324 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 TXNIPQ9H3M7 391 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 LMAN1LQ9HAT1 526 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 MTFP1Q9UDX5 166 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 MKL2Q9ULH7 1088 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 ALPK2Q86TB3 2170 aa16.53■□□□□ 0.24
SYNE4-204ENST00000465425 A8MVM7 634 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 RAD1O60671 282 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 C4BPBP20851 252 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 OR1D5P58170 312 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 C1orf140Q5VVS0 124 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 ZNF626Q68DY1 528 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 OR1N1Q8NGS0 311 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 RELTQ969Z4 430 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 UTP23Q9BRU9 249 aaKnown RBP16.52■□□□□ 0.24
SYNE4-204ENST00000465425 CACNA1CQ13936 2221 aa16.52■□□□□ 0.24
SYNE4-204ENST00000465425 VCANP13611 3396 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 SNRPGP15A8MWD9 76 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 G3V3Q6 166 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 MPC2O95563 127 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 IL5P05113 134 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 ITGA5P08648 1049 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 FBXO45P0C2W1 286 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 EFNA3P52797 238 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 PUDPQ08623 228 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 RAB11BQ15907 218 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 C1orf189Q5VU69 101 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 DNM1P46Q6ZS02 220 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 ZNF519Q8TB69 540 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 RNF128Q8TEB7 428 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 GINS4Q9BRT9 223 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 SEMA4CQ9C0C4 833 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 CA10Q9NS85 328 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 CKLFQ9UBR5 152 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 PPIEQ9UNP9 301 aaKnown RBP16.52■□□□□ 0.23
SYNE4-204ENST00000465425 DHDHQ9UQ10 334 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 SLC22A13Q9Y226 551 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms