RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PSG6Q00889 435 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 FGL2Q14314 439 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 MEF2DQ14814 521 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 KIR2DS3Q14952 304 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 NR0B2Q15466 257 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZNHIT3Q15649 155 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 GUCA2BQ16661 112 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 MANEAQ5SRI9 462 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 C3orf33Q6P1S2 294 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 TMED4Q7Z7H5 227 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SKA3Q8IX90 412 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZNF440Q8IYI8 595 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 PRSS35Q8N3Z0 413 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 TMEM52Q8NDY8 209 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 OR4E2Q8NGC2 313 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 OR10AC1Q8NH08 325 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 OR8S1Q8NH09 359 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 CD99L2Q8TCZ2 262 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 DVL3Q92997 716 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 ARL11Q969Q4 196 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 C3orf49Q96BT1 292 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SCARF2Q96GP6 870 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 PDCD10Q9BUL8 212 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ASF1BQ9NVP2 202 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 MBD2Q9UBB5 411 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 CTSFQ9UBX1 484 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZNF629Q9UEG4 869 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 LAMP5Q9UJQ1 280 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 PILRAQ9UKJ1 303 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 IKZF2Q9UKS7 526 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 IGKV1D-42A0A075B6H8 117 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 MEIS3P1A6NDR6 274 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 CTSVO60911 334 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 KAT7O95251 611 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SNAPINO95295 136 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 LINC00271P0C7V0 271 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SLC35E2P0CK97 266 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 CD79AP11912 226 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 CSF2RAP15509 400 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZBTB25P24278 435 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 GRK6P43250 576 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 NR0B1P51843 470 aaKnown RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 ARHGDIBP52566 201 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 NAAAQ02083 359 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 FAM53BQ14153 422 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 TAF13Q15543 124 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 TSC22D1Q15714 1073 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 INPP5JQ15735 1006 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 PNLIPRP3Q17RR3 467 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ITPRIPL2Q3MIP1 535 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 GXYLT1Q4G148 440 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 PHF19Q5T6S3 580 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ARHGAP40Q5TG30 622 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 RAB12Q6IQ22 244 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 FAHD2BQ6P2I3 314 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 LYG2Q86SG7 212 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SLC25A42Q86VD7 318 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 GALNT16Q8N428 558 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZDHHC22Q8N966 263 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 OR13C8Q8NGS7 320 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 PPP1R1CQ8WVI7 109 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 TSEN15Q8WW01 171 aaKnown RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 ING5Q8WYH8 240 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZBTB8AQ96BR9 441 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZNF707Q96C28 371 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 FAHD2AQ96GK7 314 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SLC41A2Q96JW4 573 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 TINAGL1Q9GZM7 467 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 ATG5Q9H1Y0 275 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SEMA6CQ9H3T2 930 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ZFP57Q9NU63 452 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 THAP10Q9P2Z0 257 aaPredicted RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 MKL2Q9ULH7 1088 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 ERVK-19Q9WJR5 959 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 NOP16Q9Y3C1 178 aaKnown RBP6.61□□□□□ -1.35
USP48-206ENST00000464577 TICRRQ7Z2Z1 1910 aa6.61□□□□□ -1.35
USP48-206ENST00000464577 SNRNP200O75643 2136 aaKnown RBP6.6□□□□□ -1.35
USP48-206ENST00000464577 A0A1B0GTH9 108 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 ZNF860A6NHJ4 632 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 OR2AT4A6NND4 320 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 HIDE1A8MVS5 230 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 ZNF736B4DX44 427 aaPredicted RBP6.6□□□□□ -1.35
USP48-206ENST00000464577 F5H0A9 414 aaPredicted RBP6.6□□□□□ -1.35
USP48-206ENST00000464577 M0QYG6 137 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 FOXS1O43638 330 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 CYB5AP00167 134 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 HLA-AP01891 365 aaKnown RBP6.6□□□□□ -1.35
USP48-206ENST00000464577 PNMTP11086 282 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 FSTP19883 344 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 TACR3P29371 465 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 AQP2P41181 271 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 PPICP45877 212 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 PRKXP51817 358 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 ATP1B3P54709 279 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 GPR85P60893 370 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 CCINQ13939 588 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 SERTAD2Q14140 314 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 CST6Q15828 149 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 ZNF74Q16587 644 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms