RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SLCO1B3Q9NPD5 702 aa19.28■□□□□ 0.68
USP4-208ENST00000464168 IGHV1-69-2A0A0G2JMI3 117 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 ERLIN1O75477 346 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 OPN1SWP03999 348 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 RAD52P43351 418 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 HIST3H3Q16695 136 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 SLC36A2Q495M3 483 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 TTC33Q6PID6 262 aaPredicted RBP19.27■□□□□ 0.68
USP4-208ENST00000464168 SLC16A14Q7RTX9 510 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 TEX29Q8N6K0 151 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 C3orf56Q8N813 242 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 C11orf65Q8NCR3 313 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 ADAMTS16Q8TE57 1224 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 SNX33Q8WV41 574 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 GTF3AQ92664 365 aaKnown RBP19.27■□□□□ 0.68
USP4-208ENST00000464168 TMBIM4Q9HC24 238 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 ZNF229Q9UJW7 825 aa19.27■□□□□ 0.68
USP4-208ENST00000464168 TRIM77I1YAP6 450 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 BCL10O95999 233 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 PTHP01270 115 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 ASAH2BP0C7U1 165 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 TBC1D28Q2M2D7 210 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 NRN1LQ496H8 165 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 MCHR2Q969V1 340 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 ZNF426Q9BUY5 554 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 BCL2L14Q9BZR8 327 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 SLC7A7Q9UM01 511 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 CACNG2Q9Y698 323 aa19.26■□□□□ 0.67
USP4-208ENST00000464168 A0A0G2JMP0 313 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 A0A0X1KG70 313 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 KPNA4O00629 521 aaPredicted RBP19.25■□□□□ 0.67
USP4-208ENST00000464168 IGHG1P01857 330 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 HIST1H2ABP04908 130 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 MMP7P09237 267 aaPredicted RBP19.25■□□□□ 0.67
USP4-208ENST00000464168 TEKQ02763 1124 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 USP51Q70EK9 711 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 HIST3H2AQ7L7L0 130 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 C1QL2Q7Z5L3 287 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 RBM15BQ8NDT2 890 aaKnown RBP19.25■□□□□ 0.67
USP4-208ENST00000464168 OR4M2Q8NGB6 313 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 OR1J2Q8NGS2 313 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 HIST1H2ACQ93077 130 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 RAB39BQ96DA2 213 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 ZMYND19Q96E35 227 aaPredicted RBP19.25■□□□□ 0.67
USP4-208ENST00000464168 ZNF347Q96SE7 839 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 RBM4Q9BWF3 364 aaKnown RBP19.25■□□□□ 0.67
USP4-208ENST00000464168 MRPL13Q9BYD1 178 aaKnown RBP19.25■□□□□ 0.67
USP4-208ENST00000464168 SLC19A3Q9BZV2 496 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 TRIM33Q9UPN9 1127 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 WIPI2Q9Y4P8 454 aa19.25■□□□□ 0.67
USP4-208ENST00000464168 IQCMA0A1B0GVH7 501 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 TRAPPC13A5PLN9 417 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 IGHV3-13P01766 116 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 IGHV2-5P01817 119 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 ATP4BP51164 291 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 CLRN1P58418 232 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 PLP2Q04941 152 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 MOGQ16653 247 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 TSTQ16762 297 aaKnown RBP19.24■□□□□ 0.67
USP4-208ENST00000464168 ICA1LQ8NDH6 482 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 CPEB3Q8NE35 698 aaKnown RBP19.24■□□□□ 0.67
USP4-208ENST00000464168 SGMS2Q8NHU3 365 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 VANGL1Q8TAA9 524 aaPredicted RBP19.24■□□□□ 0.67
USP4-208ENST00000464168 MPP4Q96JB8 637 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 JMJD8Q96S16 334 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 SEPHS2Q99611 448 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 LRMDAQ9H2I8 198 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 DECR2Q9NUI1 292 aa19.24■□□□□ 0.67
USP4-208ENST00000464168 BLOC1S5-TXNDC5H3BN57 136 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 ADRA2CP18825 462 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 CD247P20963 164 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 GLO1Q04760 184 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 SELPLGQ14242 412 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 CYP51A1Q16850 503 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 LRRC18Q8N456 261 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 SYT14Q8NB59 555 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 PRSS27Q9BQR3 290 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 PCDHAC1Q9H158 963 aa19.23■□□□□ 0.67
USP4-208ENST00000464168 MEPEQ9NQ76 525 aaPredicted RBP19.23■□□□□ 0.67
USP4-208ENST00000464168 CLDN25C9JDP6 229 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 J3QLI3 93 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 TPD52L2O43399 206 aaKnown RBP19.22■□□□□ 0.67
USP4-208ENST00000464168 UMPSP11172 480 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 DRD4P21917 467 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 LIMS1P48059 325 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 ZNF84P51523 738 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 MTPNP58546 118 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 HFEQ30201 348 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 PABPC1L2AQ5JQF8 200 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 DCAF12L2Q5VW00 463 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 NANOGNBQ7Z5D8 188 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 OR1J1Q8NGS3 322 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 SLC6A7Q99884 636 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 SUCNR1Q9BXA5 334 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 SAP30LQ9HAJ7 183 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 ESM1Q9NQ30 184 aa19.22■□□□□ 0.67
USP4-208ENST00000464168 MT-ND5P03915 603 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 F13BP05160 661 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 APLNRP35414 380 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 ZNF81P51508 661 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms