RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 CAV2P51636 162 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 NRG3P56975 720 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ERVFC1-1P60608 527 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 UBE2KP61086 200 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 PAX5Q02548 391 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 JOSD1Q15040 202 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 SURF1Q15526 300 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 GUK1Q16774 197 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 C18orf21Q32NC0 220 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CHRFAM7AQ494W8 412 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 IFI44LQ53G44 452 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 OLFML2AQ68BL7 652 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TBC1D3CQ6IPX1 549 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 KIAA1161Q6NSJ0 714 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 MED27Q6P2C8 311 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 FAM199XQ6PEV8 388 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 SHISA2Q6UWI4 295 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 METTL7BQ6UX53 244 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 HEPN1Q6WQI6 88 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 IL34Q6ZMJ4 242 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 Q6ZVH6 145 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CBLL1Q75N03 491 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 MTSS1LQ765P7 747 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 UBE3DQ7Z6J8 389 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CALHM3Q86XJ0 350 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF280BQ86YH2 543 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 LRRC56Q8IYG6 542 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF100Q8IYN0 542 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TBC1D3Q8IZP1 549 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 LYG1Q8N1E2 194 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 FAM71E2Q8N5Q1 922 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF615Q8N8J6 731 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 HJURPQ8NCD3 748 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 OR4C5Q8NGB2 326 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 OR4F15Q8NGB8 312 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CLEC4CQ8WTT0 213 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 NUDCD2Q8WVJ2 157 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CRYGNQ8WXF5 182 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TM4SF18Q96CE8 201 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 PHYHIPLQ96FC7 376 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 PANX1Q96RD7 426 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TAAR1Q96RJ0 339 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 SEMA3CQ99985 751 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 NUDT16L1Q9BRJ7 211 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 COLEC11Q9BWP8 271 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ADGRE3Q9BY15 652 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 EIF5A2Q9GZV4 153 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 IL21RQ9HBE5 538 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 RDH14Q9HBH5 336 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 MSL2Q9HCI7 577 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 NT5MQ9NPB1 228 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CHST11Q9NPF2 352 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 HEBP1Q9NRV9 189 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 THSD1Q9NS62 852 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 NCDNQ9UBB6 729 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 FBXO7Q9Y3I1 522 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF337Q9Y3M9 751 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 INSL6Q9Y581 213 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 KPTNQ9Y664 436 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TGIF2-C20orf24A0A0A6YYL0 155 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TVP23AA6NH52 213 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 SLC38A8A6NNN8 435 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 UMAD1C9J7I0 102 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 SLC25A17O43808 307 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CLDN11O75508 207 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ADAP1O75689 374 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 HMBSP08397 361 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 OR13C7P0DN81 318 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TPT1P13693 172 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 HOXB6P17509 224 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 HLA-GP17693 338 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 IL1RNP18510 177 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 MDKP21741 143 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 GALP22466 123 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CTSSP25774 331 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ELAVL4P26378 380 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 FGF9P31371 208 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 RPL4P36578 427 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CASRP41180 1078 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 GZMMP51124 257 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 MMP15P51511 669 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ERVPABLB-1P60509 514 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 ARF5P84085 180 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 EFNB1P98172 346 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TCP10Q12799 353 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 TPBGQ13641 420 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 PCGF3Q3KNV8 242 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 LDLRAD2Q5SZI1 272 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 WSCD1Q658N2 575 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 FAM83HQ6ZRV2 1179 aaPredicted RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 GAREM2Q75VX8 874 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 GALNTL5Q7Z4T8 443 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 SLC35E3Q7Z769 313 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 GID4Q8IVV7 300 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 MRPL41Q8IXM3 137 aaKnown RBP3.28□□□□□ -1.88
COL8A1-205ENST00000463753 B3GALNT2Q8NCR0 500 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 CHST13Q8NET6 341 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 OR4S1Q8NGB4 309 aa3.28□□□□□ -1.88
COL8A1-205ENST00000463753 OR5D18Q8NGL1 313 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms