RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 DYRK4Q9NR20 520 aa4.41□□□□□ -1.7
COPS3-205ENST00000463097 TREM2Q9NZC2 230 aa4.41□□□□□ -1.7
COPS3-205ENST00000463097 KLHL21Q9UJP4 597 aa4.41□□□□□ -1.7
COPS3-205ENST00000463097 FLVCR1Q9Y5Y0 555 aa4.41□□□□□ -1.7
COPS3-205ENST00000463097 EVC2Q86UK5 1308 aa4.41□□□□□ -1.7
COPS3-205ENST00000463097 ARHGEF10O15013 1369 aa4.4□□□□□ -1.7
COPS3-205ENST00000463097 CNTNAP1P78357 1384 aa4.4□□□□□ -1.7
COPS3-205ENST00000463097 ZCCHC11Q5TAX3 1644 aaKnown RBP4.4□□□□□ -1.7
COPS3-205ENST00000463097 IGHV7-81A0A0B4J1V7 117 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 TMEM120BA0PK00 339 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 GOLGA6L4A6NEF3 574 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 A6NIZ1 184 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 PRR23D1E9PI22 279 aaPredicted RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 CDC7O00311 574 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 MGRN1O60291 552 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 EEDO75530 441 aaKnown RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 SCELO95171 688 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 SMC2O95347 1197 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 TBX6O95947 436 aaPredicted RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 PRR23D2P0DMB1 279 aaPredicted RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 NEFHP12036 1026 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 FASP25445 335 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 KLK7P49862 253 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 CRISP1P54107 249 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 RAP1BP61224 184 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 ZNF829Q3KNS6 432 aaPredicted RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 OLFML2AQ68BL7 652 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 ANKRD26P1Q6NSI1 321 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 BHLHA9Q7RTU4 235 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 MRPL21Q7Z2W9 205 aaKnown RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 ZNF546Q86UE3 836 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 CMTM8Q8IZV2 173 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 PUSL1Q8N0Z8 303 aaKnown RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 PDIK1LQ8N165 341 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 SLC39A11Q8N1S5 342 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 C6orf223Q8N319 242 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 ZNF557Q8N988 423 aaPredicted RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 LKAAEAR1Q8TD35 194 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 OR1E3Q8WZA6 343 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 MYDGFQ969H8 173 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 CIDECQ96AQ7 238 aaPredicted RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 TMIGD2Q96BF3 282 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 APOL2Q9BQE5 337 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 PELOQ9BRX2 385 aaKnown RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 ACTR3CQ9C0K3 210 aaPredicted RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 MRPL47Q9HD33 250 aaKnown RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 HRASLS2Q9NWW9 162 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 KIF25Q9UIL4 384 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 GGA2Q9UJY4 613 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 CDC42BPBQ9Y5S2 1711 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 LMTK2Q8IWU2 1503 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 USP42Q9H9J4 1324 aaKnown RBP4.4□□□□□ -1.71
COPS3-205ENST00000463097 GLI2P10070 1586 aa4.4□□□□□ -1.71
COPS3-205ENST00000463097 DEPDC5O75140 1603 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 TET3O43151 1660 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 LOC100653049A0A140TA62 436 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 A0A1W2PRD5 423 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 C12orf71A8MTZ7 269 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 ZNF99A8MXY4 864 aaPredicted RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 MRPS12O15235 138 aaKnown RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 SIVA1O15304 175 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 PHF1O43189 567 aaPredicted RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 SHOX2O60902 331 aaPredicted RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 TBL1XO60907 577 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 LYPLA1O75608 230 aaPredicted RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 KRT34O76011 436 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 CLPXO76031 633 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 NPPAP01160 153 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 HLA-HP01893 362 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 IFNW1P05000 195 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 CLTAP09496 248 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 TCN1P20061 433 aaPredicted RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 SLC26A2P50443 739 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 CCNG1P51959 295 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 ADARB1P78563 741 aaKnown RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 PDIA2Q13087 525 aaKnown RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 SF3A2Q15428 464 aaKnown RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 VAX1Q5SQQ9 334 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 SLC25A25Q6KCM7 469 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 SPESP1Q6UW49 350 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 PRSS41Q7RTY9 318 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 APRG1Q8IVJ8 170 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 TRIML2Q8N7C3 387 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 ASCC1Q8N9N2 400 aaKnown RBP4.39□□□□□ -1.71
COPS3-205ENST00000463097 LRRC75AQ8NAA5 344 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 ZNF502Q8TBZ5 544 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 CA5BP1Q8WTZ4 195 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 RASL10AQ92737 203 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 FGF14Q92915 247 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 NAT6Q93015 286 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 SLC25A38Q96DW6 304 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 RARRES2Q99969 163 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 SOSTQ9BQB4 213 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 NAT9Q9BTE0 207 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 ZYG11BQ9C0D3 744 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 C20orf85Q9H1P6 137 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 GAL3ST2Q9H3Q3 398 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 UGT2A1Q9Y4X1 527 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 ARAP3Q8WWN8 1544 aa4.39□□□□□ -1.71
COPS3-205ENST00000463097 LRRC7Q96NW7 1537 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms