RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CCDC32Q9BV29 185 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 ACTRT3Q9BYD9 372 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 NXF5Q9H1B4 397 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 MMP27Q9H306 513 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 CXorf36Q9H7Y0 433 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 CRLF2Q9HC73 371 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 Q9N2J8 555 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 SIRT3Q9NTG7 399 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 MED9Q9NWA0 146 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 ALKBH4Q9NXW9 302 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 COA4Q9NYJ1 87 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 B4GALT7Q9UBV7 327 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 NDRG3Q9UGV2 375 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 MRTO4Q9UKD2 239 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 CDC42EP3Q9UKI2 254 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 OAZ3Q9UMX2 235 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 LIPT1Q9Y234 373 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 OR10H1Q9Y4A9 318 aa5.37□□□□□ -1.55
SMARCC1-204ENST00000462198 KIAA1549Q9HCM3 1950 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 A0A096LPI6 279 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 A0A0X1KG70 313 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 A0A1W2PP18 115 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 RAB19A4D1S5 217 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 DUXAA6NLW8 204 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 A8MV72 311 aaPredicted RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 LINC00587B1AMM8 73 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 H3BS24 57 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 EI24O14681 340 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 RGS5O15539 181 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CD5LO43866 347 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ZNF354AO60765 605 aaPredicted RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 REM1O75628 298 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 UGT2B17O75795 530 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC22A5O76082 557 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 C1QBP02746 253 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 HMGN2P05204 90 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CT45A8P0DMV1 189 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CT45A9P0DMV2 189 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 TMEM11P17152 192 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 C4BPBP20851 252 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 FPR1P21462 350 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC6A2P23975 617 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CFPP27918 469 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ABCD3P28288 659 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 IL12BP29460 328 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CDKN2CP42773 168 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 RFX3P48380 749 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 KCNJ5P48544 419 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 PTH2RP49190 550 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 VEGFCP49767 419 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ASCL1P50553 236 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ANXA11P50995 505 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ALDH3A2P51648 485 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 MAP2K6P52564 334 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC7A2P52569 658 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ATP12AP54707 1039 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 UGT2B15P54855 530 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 GP2P55259 537 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 FBXW4P57775 412 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 PSG6Q00889 435 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 IL1RL1Q01638 556 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ZNF91Q05481 1191 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 PRKCDQ05655 676 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 PLCXD2Q0VAA5 305 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 FADDQ13158 208 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 GAB1Q13480 694 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 NFYCQ13952 458 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ACKR1Q16570 336 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 FBXL19-AS1Q494R0 122 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CT45A2Q5DJT8 189 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CLLU1Q5K131 121 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 PDSS1Q5T2R2 415 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 RIPPLY2Q5TAB7 128 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 LAIR2Q6ISS4 152 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 MFSD12Q6NUT3 480 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 TMEM81Q6P7N7 255 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ZCCHC12Q6PEW1 402 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 IL20RBQ6UXL0 311 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 RTL4Q6ZR62 310 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 C6orf120Q7Z4R8 191 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 COX18Q8N8Q8 333 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ZNF441Q8N8Z8 693 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CDRT4Q8N9R6 151 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 RELL2Q8NC24 303 aaPredicted RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 C11orf65Q8NCR3 313 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 OR10H5Q8NGA6 315 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 OR52E4Q8NGH9 312 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 OR52H1Q8NGJ2 320 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ADAMTS15Q8TE58 950 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 GTF3AQ92664 365 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 CDS1Q92903 461 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 TMBIM1Q969X1 311 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 SPACA9Q96E40 222 aaPredicted RBP5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 YIPF6Q96EC8 236 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 C16orf58Q96GQ5 468 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 TMEM41AQ96HV5 264 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 ST6GAL2Q96JF0 529 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 MEGF10Q96KG7 1140 aa5.36□□□□□ -1.55
SMARCC1-204ENST00000462198 SLC35G5Q96KT7 338 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms