RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 NKAPLQ5M9Q1 402 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 SLC25A30Q5SVS4 291 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 HACD4Q5VWC8 232 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 TMEM91Q6ZNR0 172 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 ABHD12BQ7Z5M8 362 aaPredicted RBP10.58□□□□□ -0.71
NPHP4-204ENST00000460696 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 MOGAT1Q96PD6 335 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 BCL2L14Q9BZR8 327 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 KLK11Q9UBX7 282 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 PCOLCE2Q9UKZ9 415 aa10.58□□□□□ -0.71
NPHP4-204ENST00000460696 MED12Q93074 2177 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 A0A1B0GX78 115 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 TRIM64BA6NI03 449 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ZSCAN5BA6NJL1 495 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF736B4DX44 427 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 EEF1E1-BLOC1S5C9J1V9 151 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SULT2B1O00204 365 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ZFPL1O95159 310 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 RECKO95980 971 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CLDN20P56880 219 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 MRPS10P82664 201 aaKnown RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 GLYATL3Q5SZD4 288 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CORO6Q6QEF8 472 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF704Q6ZNC4 412 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 C16orf47Q6ZP98 133 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 OVCH1Q7RTY7 1134 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 STT3BQ8TCJ2 826 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 HAVCR2Q8TDQ0 301 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 PRSS27Q9BQR3 290 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CHRDQ9H2X0 955 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 NIPAL2Q9H841 368 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 TMEM74BQ9NUR3 256 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 VSX1Q9NZR4 365 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SPAARA0A1B0GVQ0 90 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 A6NIZ1 184 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 TNFSF14O43557 240 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 PRAF2O60831 178 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CDK2P24941 298 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 RAP1BP61224 184 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 RAP1AP62834 184 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CXADRP78310 365 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 COL28A1Q2UY09 1125 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 TMEM176BQ3YBM2 270 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SSX6Q7RTT6 188 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ARIH2OSQ8N7S6 290 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 OR13C9Q8NGT0 318 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 GPR119Q8TDV5 335 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 C8orf44Q96CB5 159 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SIGLEC11Q96RL6 698 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SEMA4CQ9C0C4 833 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 C20orf85Q9H1P6 137 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF701Q9NV72 531 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 H0YIG0 161 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SIX6O95475 246 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 C1QBP02746 253 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ADRA2AP08913 450 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 AKAIN1P0CW23 69 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SLC2A1P11166 492 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 APEHP13798 732 aaKnown RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ATF4P18848 351 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CD53P19397 219 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ANXA7P20073 488 aaKnown RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CDKN2AP42771 156 aaKnown RBP10.58□□□□□ -0.72
NPHP4-204ENST00000460696 CCR9P51686 369 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 BIDP55957 195 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF85Q03923 595 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 TMEM17Q86X19 198 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 PPP1R3BQ86XI6 285 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 SLC43A2Q8N370 569 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 OR4D9Q8NGE8 314 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 OR5M1Q8NGP8 315 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 UPRTQ96BW1 309 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 NUDT9Q9BW91 350 aa10.58□□□□□ -0.72
NPHP4-204ENST00000460696 P2RY10O00398 339 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 ZFAND5O76080 213 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 IGHA1P01876 353 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 CSF1P09603 554 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 IFNGR1P15260 489 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 CLDN6P56747 220 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 DEFA5Q01523 94 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 SMCO1Q147U7 214 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 ZMYND11Q15326 602 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF74Q16587 644 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 TMEM244Q5VVB8 128 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 FAM3DQ96BQ1 224 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 CCDC120Q96HB5 630 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 STRADBQ9C0K7 418 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 KCNE5Q9UJ90 142 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 PTRH2Q9Y3E5 179 aaKnown RBP10.57□□□□□ -0.72
NPHP4-204ENST00000460696 PI4KAP42356 2102 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 POM121CA8CG34 1229 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 AKR7A3O95154 331 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 EVI2BP34910 448 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 RPL27P61353 136 aaKnown RBP10.57□□□□□ -0.72
NPHP4-204ENST00000460696 C17orf67Q0P5P2 114 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 CD226Q15762 336 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 HLA-BQ31612 363 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 NKAIN1Q4KMZ8 207 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 RNLSQ5VYX0 342 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 COX15Q7KZN9 410 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms