RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 VASH1Q7L8A9 365 aaPredicted RBP21.73■■□□□ 1.07
U2AF1-204ENST00000459639 SNX33Q8WV41 574 aa21.73■■□□□ 1.07
U2AF1-204ENST00000459639 TSC22D3Q99576 134 aa21.73■■□□□ 1.07
U2AF1-204ENST00000459639 MRPL22Q9NWU5 206 aaKnown RBP21.73■■□□□ 1.07
U2AF1-204ENST00000459639 LIPGQ9Y5X9 500 aa21.73■■□□□ 1.07
U2AF1-204ENST00000459639 J3QLW9 94 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 PHYHO14832 338 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 ITGB2P05107 769 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF19P17023 458 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF24P17028 368 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 OR12D2P58182 307 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 VBP1P61758 197 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 LSM3P62310 102 aaKnown RBP21.72■■□□□ 1.07
U2AF1-204ENST00000459639 PMP22Q01453 160 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 GDPGP1Q6ZNW5 385 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 EGFL6Q8IUX8 553 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 DCUN1D5Q9BTE7 237 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 DEFB127Q9H1M4 99 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 LDAHQ9H6V9 325 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 STUB1Q9UNE7 303 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 TRGV5A0A0B4J1U4 118 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 IGKV1D-43A0A0B4J1Z2 117 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF716A6NP11 495 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 TFECO14948 347 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-204ENST00000459639 RRP8O43159 456 aaKnown RBP21.72■■□□□ 1.07
U2AF1-204ENST00000459639 CYTIPO60759 359 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 SH3BGRP55822 239 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-204ENST00000459639 NCS1P62166 190 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 GPR50Q13585 617 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 SLC26A10Q8NG04 563 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 ROBO4Q8WZ75 1007 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF845Q96IR2 970 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF385AQ96PM9 386 aaKnown RBP21.72■■□□□ 1.07
U2AF1-204ENST00000459639 OR2M2Q96R28 347 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 CHCHD6Q9BRQ6 235 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 TTTY10Q9BZA0 68 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 KLHL9Q9P2J3 617 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 LAMP5Q9UJQ1 280 aa21.72■■□□□ 1.07
U2AF1-204ENST00000459639 GAAP10253 952 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 ALOX5APP20292 161 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 GABRA5P31644 462 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 ENTPD1P49961 510 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF169Q14929 603 aaPredicted RBP21.71■■□□□ 1.07
U2AF1-204ENST00000459639 TP53I3Q53FA7 332 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 CARD17Q5XLA6 110 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 FCRLAQ7L513 359 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 DPY19L4Q7Z388 723 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 GLB1L2Q8IW92 636 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 ZFP41Q8N8Y5 198 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 ZIC4Q8N9L1 334 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 OTOSQ8NHW6 89 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 PNPLA2Q96AD5 504 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 FOXN4Q96NZ1 517 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 EXO5Q9H790 373 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 RCE1Q9Y256 329 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 KLHDC2Q9Y2U9 406 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 SF3B6Q9Y3B4 125 aaKnown RBP21.71■■□□□ 1.07
U2AF1-204ENST00000459639 FLVCR1Q9Y5Y0 555 aa21.71■■□□□ 1.07
U2AF1-204ENST00000459639 ZNF407Q9C0G0 2248 aa21.7■■□□□ 1.07
U2AF1-204ENST00000459639 LOC100506127A0A0U1RQW1 187 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 HRGP04196 525 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 CELP19835 753 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 ADAM8P78325 824 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 SRYQ05066 204 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 ZNF684Q5T5D7 378 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 SLC25A47Q6Q0C1 308 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 PLEKHG7Q6ZR37 379 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 TMEM123Q8N131 208 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 TMEM54Q969K7 222 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 DCHS1Q96JQ0 3298 aa21.7■■□□□ 1.06
U2AF1-204ENST00000459639 PNMA8CA0A1B0GUJ8 204 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 ZNF593O00488 134 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-204ENST00000459639 GPX5O75715 221 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 ZNF432O94892 652 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 IGHG3P01860 377 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 CRYBB2P43320 205 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 CSNK1A1P48729 337 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 KCTD20Q7Z5Y7 419 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 NDNFQ8TB73 568 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 INTS12Q96CB8 462 aaKnown RBP21.69■■□□□ 1.06
U2AF1-204ENST00000459639 PELI1Q96FA3 418 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 GNG8Q9UK08 70 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 APC2O95996 2303 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 K7ENP7 123 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 SYNGR4O95473 234 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 ZNF182P17025 639 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-204ENST00000459639 GBX2P52951 348 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-204ENST00000459639 RPS25P62851 125 aaKnown RBP21.69■■□□□ 1.06
U2AF1-204ENST00000459639 EGR3Q06889 387 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 TEX30Q5JUR7 227 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 INO80CQ6PI98 192 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-204ENST00000459639 ZNF454Q8N9F8 522 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 ASB17Q8WXJ9 295 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 NSMAFQ92636 917 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 MCHR2Q969V1 340 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 CENPOQ9BU64 300 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 GLTPQ9NZD2 209 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 KCNG2Q9UJ96 466 aa21.69■■□□□ 1.06
U2AF1-204ENST00000459639 MCTS1Q9ULC4 181 aaKnown RBP21.69■■□□□ 1.06
U2AF1-204ENST00000459639 DNAJC13O75165 2243 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms