RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TMPRSS12Q86WS5 348 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ZNF227Q86WZ6 799 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CDC20BQ86Y33 519 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 PXT1Q8NFP0 134 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ZNF417Q8TAU3 575 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 LIPHQ8WWY8 451 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 EDAQ92838 391 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 TRIM43Q96BQ3 446 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 RASD2Q96D21 266 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 Q96M85 177 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SLC38A3Q99624 504 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 MFFQ9GZY8 342 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 OR51M1Q9H341 326 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SAV1Q9H4B6 383 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 BARX1Q9HBU1 254 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 APMAPQ9HDC9 416 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 MYOZ1Q9NP98 299 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 ZDHHC4Q9NPG8 344 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SLC17A5Q9NRA2 495 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 RASL12Q9NYN1 266 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SLC6A5Q9Y345 797 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SPACA6W5XKT8 324 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DOCK8Q8NF50 2099 aa7.71□□□□□ -1.17
VPS50-208ENST00000458707 CACNA1IQ9P0X4 2223 aa7.71□□□□□ -1.17
VPS50-208ENST00000458707 TRAV8-7A0A075B6U6 113 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 TRAV14DV4A0A0A6YYC5 116 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 A0A0D9SG52 128 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 TMEM72A0PK05 275 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 OR4C45A6NMZ5 311 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 EFCAB7A8K855 629 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 SOX1O00570 391 aaPredicted RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 PMS2P2O95744 297 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 IGKV1D-16P01601 117 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 RLN1P04808 185 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 ANXA2P07355 339 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 OR8G3PP0DMU2 310 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 CSF2RAP15509 400 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 S1PR1P21453 382 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 AGTR1P30556 359 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 CDKN2AP42771 156 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 FNTBP49356 437 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 RIDAP52758 137 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 RPS21P63220 83 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 ENPP2Q13822 863 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 FAM53BQ14153 422 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 ZNF345Q14585 488 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 PDGFRLQ15198 375 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 EIF2S3LQ2VIR3 472 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 MOB3CQ70IA8 216 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 FAM122BQ7Z309 247 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 CLEC1AQ8NC01 280 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 FGF13Q92913 245 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 MCHR2Q969V1 340 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 ANKRD9Q96BM1 317 aaPredicted RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 ZC3H10Q96K80 434 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 CCNL2Q96S94 520 aaPredicted RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 NPAS1Q99742 590 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 APOOQ9BUR5 198 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 PBX4Q9BYU1 374 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 SEMA4CQ9C0C4 833 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 SRMSQ9H3Y6 488 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 WSB2Q9NYS7 404 aaPredicted RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 CTSFQ9UBX1 484 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 TBC1D29Q9UFV1 150 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 KLHDC2Q9Y2U9 406 aa7.71□□□□□ -1.18
VPS50-208ENST00000458707 MRPS2Q9Y399 296 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 LAMA2P24043 3122 aaKnown RBP7.71□□□□□ -1.18
VPS50-208ENST00000458707 A0A1B0GVT2 93 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 A0A1W2PP55 124 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ZNF860A6NHJ4 632 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 TMEM212A6NML5 194 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CRTAPO75718 401 aaPredicted RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 RPP14O95059 124 aaKnown RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 SPDEFO95238 335 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 EML2O95834 649 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 TXNDC12O95881 172 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 IGHV2-70P01814 119 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 PRF1P14222 555 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ITGB8P26012 769 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 GRPRP30550 384 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ADH7P40394 386 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 UBE2MP61081 183 aaKnown RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 ERVK-25P63136 954 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SORDQ00796 357 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 DMWDQ09019 674 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SGCGQ13326 291 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 MELKQ14680 651 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 GRM7Q14831 915 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SMAD2Q15796 467 aaKnown RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 PABPC1L2AQ5JQF8 200 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 FAM78AQ5JUQ0 283 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 LY6G6FQ5SQ64 297 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 MANEAQ5SRI9 462 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 LCE2CQ5TA81 110 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 NKAIN2Q5VXU1 208 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 C3orf33Q6P1S2 294 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 LEG1Q6P5S2 330 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms