RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 DPPA2Q7Z7J5 298 aa15.06■□□□□ 0
USP39-208ENST00000455732 BIVMQ86UB2 503 aa15.06■□□□□ 0
USP39-208ENST00000455732 CIARTQ8N365 385 aaPredicted RBP15.06■□□□□ 0
USP39-208ENST00000455732 SLC22A24Q8N4F4 322 aa15.06■□□□□ 0
USP39-208ENST00000455732 SYT14Q8NB59 555 aa15.06■□□□□ 0
USP39-208ENST00000455732 IL17RDQ8NFM7 739 aa15.06■□□□□ 0
USP39-208ENST00000455732 OR52J3Q8NH60 311 aa15.06■□□□□ 0
USP39-208ENST00000455732 COX4I2Q96KJ9 171 aa15.06■□□□□ 0
USP39-208ENST00000455732 ZNF75AQ96N20 296 aa15.06■□□□□ 0
USP39-208ENST00000455732 SMR3AQ99954 134 aa15.06■□□□□ 0
USP39-208ENST00000455732 KCNS3Q9BQ31 491 aa15.06■□□□□ 0
USP39-208ENST00000455732 NOX3Q9HBY0 568 aa15.06■□□□□ 0
USP39-208ENST00000455732 FBXL3Q9UKT7 428 aa15.06■□□□□ 0
USP39-208ENST00000455732 ZNF346Q9UL40 294 aaKnown RBP15.06■□□□□ 0
USP39-208ENST00000455732 SIGLEC7Q9Y286 467 aa15.06■□□□□ 0
USP39-208ENST00000455732 ABCA2Q9BZC7 2435 aa15.06■□□□□ 0
USP39-208ENST00000455732 TRIM64A6NGJ6 449 aa15.05■□□□□ -0
USP39-208ENST00000455732 TRIM64BA6NI03 449 aa15.05■□□□□ -0
USP39-208ENST00000455732 PTP4A3O75365 173 aa15.05■□□□□ -0
USP39-208ENST00000455732 KRT36O76013 467 aa15.05■□□□□ -0
USP39-208ENST00000455732 CELA3BP08861 270 aa15.05■□□□□ -0
USP39-208ENST00000455732 OR8G3PP0DMU2 310 aa15.05■□□□□ -0
USP39-208ENST00000455732 HOXB4P17483 251 aaPredicted RBP15.05■□□□□ -0
USP39-208ENST00000455732 RRM2P31350 389 aa15.05■□□□□ -0
USP39-208ENST00000455732 CDKN1AP38936 164 aa15.05■□□□□ -0
USP39-208ENST00000455732 ZNF84P51523 738 aa15.05■□□□□ -0
USP39-208ENST00000455732 MYPOPQ86VE0 399 aaPredicted RBP15.05■□□□□ -0
USP39-208ENST00000455732 IGFN1Q86VF2 1251 aa15.05■□□□□ -0
USP39-208ENST00000455732 FBXL14Q8N1E6 418 aa15.05■□□□□ -0
USP39-208ENST00000455732 MUC15Q8N387 334 aa15.05■□□□□ -0
USP39-208ENST00000455732 ARIH2OSQ8N7S6 290 aa15.05■□□□□ -0
USP39-208ENST00000455732 NUP37Q8NFH4 326 aa15.05■□□□□ -0
USP39-208ENST00000455732 OR4F15Q8NGB8 312 aa15.05■□□□□ -0
USP39-208ENST00000455732 RSRC1Q96IZ7 334 aaKnown RBP15.05■□□□□ -0
USP39-208ENST00000455732 BDH2Q9BUT1 245 aa15.05■□□□□ -0
USP39-208ENST00000455732 SEC61A2Q9H9S3 476 aa15.05■□□□□ -0
USP39-208ENST00000455732 CBLN4Q9NTU7 201 aa15.05■□□□□ -0
USP39-208ENST00000455732 AURKCQ9UQB9 309 aa15.05■□□□□ -0
USP39-208ENST00000455732 ATP23Q9Y6H3 246 aa15.05■□□□□ -0
USP39-208ENST00000455732 CR1P17927 2039 aa15.05■□□□□ -0
USP39-208ENST00000455732 IGHV2OR16-5A0A0B4J2B6 119 aa15.04■□□□□ -0
USP39-208ENST00000455732 H7C1Q1 480 aa15.04■□□□□ -0
USP39-208ENST00000455732 ACOT8O14734 319 aa15.04■□□□□ -0
USP39-208ENST00000455732 NDUFB2O95178 105 aa15.04■□□□□ -0
USP39-208ENST00000455732 FARS2O95363 451 aaKnown RBP15.04■□□□□ -0
USP39-208ENST00000455732 CD79AP11912 226 aa15.04■□□□□ -0
USP39-208ENST00000455732 ZNF14P17017 642 aaPredicted RBP15.04■□□□□ -0
USP39-208ENST00000455732 FPR3P25089 353 aa15.04■□□□□ -0
USP39-208ENST00000455732 CALCRP30988 508 aa15.04■□□□□ -0
USP39-208ENST00000455732 RPL4P36578 427 aaKnown RBP15.04■□□□□ -0
USP39-208ENST00000455732 ACVR1BP36896 505 aa15.04■□□□□ -0
USP39-208ENST00000455732 FABP6P51161 128 aa15.04■□□□□ -0
USP39-208ENST00000455732 HMGA2P52926 109 aa15.04■□□□□ -0
USP39-208ENST00000455732 MYBPC1Q00872 1141 aa15.04■□□□□ -0
USP39-208ENST00000455732 CD47Q08722 323 aa15.04■□□□□ -0
USP39-208ENST00000455732 TRAP1Q12931 704 aaKnown RBP15.04■□□□□ -0
USP39-208ENST00000455732 NPRL3Q12980 569 aa15.04■□□□□ -0
USP39-208ENST00000455732 THEM4Q5T1C6 240 aa15.04■□□□□ -0
USP39-208ENST00000455732 SLC25A47Q6Q0C1 308 aa15.04■□□□□ -0
USP39-208ENST00000455732 FAM122BQ7Z309 247 aa15.04■□□□□ -0
USP39-208ENST00000455732 ZER1Q7Z7L7 766 aa15.04■□□□□ -0
USP39-208ENST00000455732 SKA3Q8IX90 412 aa15.04■□□□□ -0
USP39-208ENST00000455732 GTPBP3Q969Y2 492 aaKnown RBP15.04■□□□□ -0
USP39-208ENST00000455732 CCDC124Q96CT7 223 aaKnown RBP15.04■□□□□ -0
USP39-208ENST00000455732 TRMT61AQ96FX7 289 aaKnown RBP15.04■□□□□ -0
USP39-208ENST00000455732 CLPTM1LQ96KA5 538 aa15.04■□□□□ -0
USP39-208ENST00000455732 GPA33Q99795 319 aa15.04■□□□□ -0
USP39-208ENST00000455732 THTPAQ9BU02 230 aa15.04■□□□□ -0
USP39-208ENST00000455732 UGT2A1Q9Y4X1 527 aa15.04■□□□□ -0
USP39-208ENST00000455732 IGKV1D-43A0A0B4J1Z2 117 aa15.03■□□□□ -0
USP39-208ENST00000455732 UNC119BA6NIH7 251 aa15.03■□□□□ -0
USP39-208ENST00000455732 AHCYL1O43865 530 aa15.03■□□□□ -0
USP39-208ENST00000455732 SLC2A10O95528 541 aa15.03■□□□□ -0
USP39-208ENST00000455732 RAB36O95755 333 aa15.03■□□□□ -0
USP39-208ENST00000455732 APOBEC3AP31941 199 aaPredicted RBP15.03■□□□□ -0
USP39-208ENST00000455732 IFNGR2P38484 337 aa15.03■□□□□ -0
USP39-208ENST00000455732 GIPRP48546 466 aa15.03■□□□□ -0
USP39-208ENST00000455732 FXYD6P3P58550 94 aa15.03■□□□□ -0
USP39-208ENST00000455732 RAB1AP62820 205 aa15.03■□□□□ -0
USP39-208ENST00000455732 ERVK-25P63136 954 aa15.03■□□□□ -0
USP39-208ENST00000455732 MRPS34P82930 218 aaKnown RBP15.03■□□□□ -0
USP39-208ENST00000455732 ETFDHQ16134 617 aa15.03■□□□□ -0
USP39-208ENST00000455732 PGM2L1Q6PCE3 622 aa15.03■□□□□ -0
USP39-208ENST00000455732 SLC7A6OSQ96CW6 309 aaPredicted RBP15.03■□□□□ -0
USP39-208ENST00000455732 RBP7Q96R05 134 aa15.03■□□□□ -0
USP39-208ENST00000455732 TRIM15Q9C019 465 aa15.03■□□□□ -0
USP39-208ENST00000455732 NRIP3Q9NQ35 241 aa15.03■□□□□ -0
USP39-208ENST00000455732 CA10Q9NS85 328 aa15.03■□□□□ -0
USP39-208ENST00000455732 GRHPRQ9UBQ7 328 aa15.03■□□□□ -0
USP39-208ENST00000455732 TMCC3Q9ULS5 477 aa15.03■□□□□ -0
USP39-208ENST00000455732 ADAM18Q9Y3Q7 739 aa15.03■□□□□ -0
USP39-208ENST00000455732 LYVE1Q9Y5Y7 322 aa15.03■□□□□ -0
USP39-208ENST00000455732 FN1P02751 2386 aaKnown RBP15.03■□□□□ -0
USP39-208ENST00000455732 CHD3Q12873 2000 aaKnown RBP15.02■□□□□ -0
USP39-208ENST00000455732 GYG2O15488 501 aa15.02■□□□□ -0
USP39-208ENST00000455732 OR10H3O60404 316 aa15.02■□□□□ -0
USP39-208ENST00000455732 NDUFS7O75251 213 aa15.02■□□□□ -0
USP39-208ENST00000455732 STAMBPO95630 424 aa15.02■□□□□ -0
USP39-208ENST00000455732 APEHP13798 732 aaKnown RBP15.02■□□□□ -0
USP39-208ENST00000455732 NPR2P20594 1047 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms