RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 HDAC2Q92769 488 aaKnown RBP18.32■□□□□ 0.52
HMGB3-205ENST00000455596 TNFRSF13CQ96RJ3 184 aa18.32■□□□□ 0.52
HMGB3-205ENST00000455596 DYNLRB1Q9NP97 96 aa18.32■□□□□ 0.52
HMGB3-205ENST00000455596 EGFL7Q9UHF1 273 aa18.32■□□□□ 0.52
HMGB3-205ENST00000455596 SLC7A8Q9UHI5 535 aa18.32■□□□□ 0.52
HMGB3-205ENST00000455596 A0A087WUU8 490 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 SH3PXD2BA1X283 911 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 EFCAB9A8MZ26 197 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 NDUFS8O00217 210 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 GPRIN2O60269 458 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 MGRN1O60291 552 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 GMNNO75496 209 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 PRSS23O95084 383 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 IGHMP01871 453 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 GLRXP35754 106 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 CTXN1P60606 82 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 RPL27P61353 136 aaKnown RBP18.31■□□□□ 0.52
HMGB3-205ENST00000455596 RPS23P62266 143 aaKnown RBP18.31■□□□□ 0.52
HMGB3-205ENST00000455596 CD47Q08722 323 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 TOP3AQ13472 1001 aaPredicted RBP18.31■□□□□ 0.52
HMGB3-205ENST00000455596 RRM2BQ7LG56 351 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 OAFQ86UD1 273 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 MEX3DQ86XN8 651 aaKnown RBP18.31■□□□□ 0.52
HMGB3-205ENST00000455596 OR51A7Q8NH64 312 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 MRPL24Q96A35 216 aaKnown RBP18.31■□□□□ 0.52
HMGB3-205ENST00000455596 KCNK17Q96T54 332 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 PIMREGQ9BSJ6 248 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 ANKRD19PQ9H560 264 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 SMURF2Q9HAU4 748 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 ENPP4Q9Y6X5 453 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 NAV3Q8IVL0 2385 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 ZANQ9Y493 2812 aa18.31■□□□□ 0.52
HMGB3-205ENST00000455596 TLN2Q9Y4G6 2542 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 TRAV27A0A087WT01 109 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 SLC2A10O95528 541 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 PTHP01270 115 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 SLC9A3P48764 834 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 EVX1P49640 407 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 GYS2P54840 703 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 CARTPTQ16568 116 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 TMEM249Q2WGJ8 235 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 MBOAT2Q6ZWT7 520 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 IGFN1Q86VF2 1251 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 LRRC18Q8N456 261 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 LRRC75AQ8NAA5 344 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 RBM15BQ8NDT2 890 aaKnown RBP18.3■□□□□ 0.52
HMGB3-205ENST00000455596 SLC30A7Q8NEW0 376 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 FNDC8Q8TC99 324 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 NEU4Q8WWR8 484 aaPredicted RBP18.3■□□□□ 0.52
HMGB3-205ENST00000455596 KCNN2Q9H2S1 579 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 C1orf198Q9H425 327 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 YAE1D1Q9NRH1 226 aa18.3■□□□□ 0.52
HMGB3-205ENST00000455596 ZNF346Q9UL40 294 aaKnown RBP18.3■□□□□ 0.52
HMGB3-205ENST00000455596 SAMD4AQ9UPU9 718 aaKnown RBP18.3■□□□□ 0.52
HMGB3-205ENST00000455596 FAM32AQ9Y421 112 aaKnown RBP18.3■□□□□ 0.52
HMGB3-205ENST00000455596 IQCMA0A1B0GVH7 501 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 LOC390937A0A1W2PQ73 354 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 USF1P22415 310 aaPredicted RBP18.29■□□□□ 0.52
HMGB3-205ENST00000455596 MRPS34P82930 218 aaKnown RBP18.29■□□□□ 0.52
HMGB3-205ENST00000455596 FMODQ06828 376 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 FXNQ16595 210 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 FAM205BPQ63HN1 556 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 TBPL2Q6SJ96 375 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 RNF148Q8N7C7 305 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 OR13C2Q8NGS9 318 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 NMD3Q96D46 503 aaKnown RBP18.29■□□□□ 0.52
HMGB3-205ENST00000455596 ALG12Q9BV10 488 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 MRPL37Q9BZE1 423 aaKnown RBP18.29■□□□□ 0.52
HMGB3-205ENST00000455596 NMNAT1Q9HAN9 279 aaPredicted RBP18.29■□□□□ 0.52
HMGB3-205ENST00000455596 SIAEQ9HAT2 523 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 DCAF13Q9NV06 445 aaKnown RBP18.29■□□□□ 0.52
HMGB3-205ENST00000455596 ARL2BPQ9Y2Y0 163 aa18.29■□□□□ 0.52
HMGB3-205ENST00000455596 SLC22A23A1A5C7 686 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 VWC2LB2RUY7 222 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 CRLF1O75462 422 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 GPR4P46093 362 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 VLDLRP98155 873 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 PLP2Q04941 152 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 FHL1Q13642 323 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 MSMPQ1L6U9 139 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 THEM4Q5T1C6 240 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 SLC25A47Q6Q0C1 308 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 TMPRSS11FQ6ZWK6 438 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 TSEN54Q7Z6J9 526 aaKnown RBP18.28■□□□□ 0.52
HMGB3-205ENST00000455596 ZCCHC24Q8N2G6 241 aaKnown RBP18.28■□□□□ 0.52
HMGB3-205ENST00000455596 OR1J2Q8NGS2 313 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 NSMAFQ92636 917 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 RBP7Q96R05 134 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 CDH20Q9HBT6 801 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 CCNB1IP1Q9NPC3 277 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 TMEM5Q9Y2B1 443 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 UGT2A1Q9Y4X1 527 aa18.28■□□□□ 0.52
HMGB3-205ENST00000455596 IGKV1D-43A0A0B4J1Z2 117 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 A6NIZ1 184 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 M0R233 179 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 SYNGR3O43761 229 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 H1F0P07305 194 aaKnown RBP18.27■□□□□ 0.52
HMGB3-205ENST00000455596 ADRA2AP08913 450 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 RHCEP18577 417 aa18.27■□□□□ 0.52
HMGB3-205ENST00000455596 TCN1P20061 433 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms