RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 GCH1P30793 250 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 APLNRP35414 380 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF84P51523 738 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 POLR2JP52435 117 aaKnown RBP12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 OR1Q1Q15612 314 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF718Q3SXZ3 478 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 WDR88Q6ZMY6 472 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 WDFY1Q8IWB7 410 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 PAQR4Q8N4S7 273 aaPredicted RBP12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 SPICQ8N5J4 248 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 SIGLECL1Q8N7X8 197 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 RBM15BQ8NDT2 890 aaKnown RBP12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 GTF2H4Q92759 462 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 MAL2Q969L2 176 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 SLC19A3Q9BZV2 496 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 WDR55Q9H6Y2 383 aaPredicted RBP12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 SLCO1B3Q9NPD5 702 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 THAP1Q9NVV9 213 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 PURGQ9UJV8 347 aaKnown RBP12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 CORO2BQ9UQ03 480 aa12.12□□□□□ -0.47
LYSMD3-202ENST00000453259 CHP2O43745 196 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 ICMTO60725 284 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 IGHG1P01857 330 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 IGHMP01871 453 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 CD55P08174 381 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 NUDT7P0C024 238 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 PATE4P0C8F1 98 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 NR2C1P13056 603 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 MMP15P51511 669 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 CDH12P55289 794 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 LCN2P80188 198 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 CDK6Q00534 326 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 HIST3H3Q16695 136 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 KRT71Q3SY84 523 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 GTDC1Q4AE62 458 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 GCNT6Q5T4J0 391 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 LRFN4Q6PJG9 635 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 LINC00114Q6XXX2 140 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 ZER1Q7Z7L7 766 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 DEFB108BQ8NET1 73 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 OR4K5Q8NGD3 323 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 OR1J1Q8NGS3 322 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 CCL17Q92583 94 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 TSPAN32Q96QS1 320 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 SH3GL3Q99963 347 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 MRI1Q9BV20 369 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 PAIP1Q9H074 479 aaKnown RBP12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 KCNN2Q9H2S1 579 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 TMEM38AQ9H6F2 299 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 EIF3KQ9UBQ5 218 aaKnown RBP12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF229Q9UJW7 825 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 MMP24Q9Y5R2 645 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 AUP1Q9Y679 476 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 TRRAPQ9Y4A5 3859 aa12.11□□□□□ -0.47
LYSMD3-202ENST00000453259 ISPDA4D126 451 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 GMNCA6NCL1 334 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 A8MXK9 166 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 SERPINI2O75830 405 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 IGHV1-46P01743 117 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 HOXB9P17482 250 aaPredicted RBP12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 MTNR1AP48039 350 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 MRPL19P49406 292 aaKnown RBP12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF133P52736 654 aaPredicted RBP12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 HSF2Q03933 536 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF154Q13106 437 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 BAMBIQ13145 260 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF74Q16587 644 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 TSTQ16762 297 aaKnown RBP12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 TMEM155Q4W5P6 130 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 MIDNQ504T8 468 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 LRIF1Q5T3J3 769 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 NXNQ6DKJ4 435 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 C9orf139Q6ZV77 190 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 KLHL36Q8N4N3 616 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 MREGQ8N565 214 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 AENQ8WTP8 325 aaKnown RBP12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 C22orf15Q8WYQ4 148 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 SEPHS2Q99611 448 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 SMURF2Q9HAU4 748 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 NANSQ9NR45 359 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 IL20RAQ9UHF4 553 aa12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 LEF1Q9UJU2 399 aaPredicted RBP12.1□□□□□ -0.47
LYSMD3-202ENST00000453259 UBDO15205 165 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 RNF13O43567 381 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 SNNO75324 88 aaPredicted RBP12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 QDPRP09417 244 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 ZNF12P17014 697 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 TUBG1P23258 451 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 SLC6A2P23975 617 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 STOMP27105 288 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 ERVS71-1P61550 626 aa12.09□□□□□ -0.47
LYSMD3-202ENST00000453259 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms