RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CST8O60676 142 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 SCRG1O75711 98 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 POP7O75817 140 aaKnown RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 PDE5AO76074 875 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 NXPH4O95158 308 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 IGF1P05019 195 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 KLK3P07288 261 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 CAPN1P07384 714 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 OR9G9P0C7N8 305 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 NELFEP18615 380 aaKnown RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 NCF2P19878 526 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 LAP3P28838 519 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 HNRNPH3P31942 346 aaKnown RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 HMGCLP35914 325 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 CRYBA2P53672 197 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 FGL1Q08830 312 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 IHHQ14623 411 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 SPA17Q15506 151 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 CHRNA6Q15825 494 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 IGFBP7Q16270 282 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TEX44Q53QW1 395 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TFDP3Q5H9I0 405 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TMEM220Q6QAJ8 160 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 PID1Q7Z2X4 250 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TSEN54Q7Z6J9 526 aaKnown RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 CCDC71Q8IV32 467 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 ZNF547Q8IVP9 402 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 OR5D13Q8NGL4 314 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 M1APQ8TC57 530 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 CT55Q8WUE5 264 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 PIGCQ92535 297 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TADA1Q96BN2 335 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 HAUS1Q96CS2 278 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 SH3YL1Q96HL8 342 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 GMPPAQ96IJ6 420 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TPD52L3Q96J77 140 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 C12orf66Q96MD2 445 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 AMDHD1Q96NU7 426 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 OLFM3Q96PB7 478 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 PPP1R2P1Q96PQ5 205 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TRIB3Q96RU7 358 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 VAT1Q99536 393 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TMEM121Q9BTD3 319 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 COMMD4Q9H0A8 199 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 NHEJ1Q9H9Q4 299 aaPredicted RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 SLC40A1Q9NP59 571 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 LHX9Q9NQ69 397 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 PLCXD1Q9NUJ7 323 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 HRASLS2Q9NWW9 162 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 ONECUT1Q9UBC0 465 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 SEC14L4Q9UDX3 406 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 SLC23A2Q9UGH3 650 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 RSPH14Q9UHP6 348 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 PSMD13Q9UNM6 376 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 TP53TG5Q9Y2B4 290 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 MRPS28Q9Y2Q9 187 aaKnown RBP3.56□□□□□ -1.84
LINC00393-202ENST00000452852 HEBP2Q9Y5Z4 205 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 PIKFYVEQ9Y2I7 2098 aa3.56□□□□□ -1.84
LINC00393-202ENST00000452852 CFAP46Q8IYW2 2715 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 CCDC88CQ9P219 2028 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 HELZ2Q9BYK8 2649 aaKnown RBP3.55□□□□□ -1.84
LINC00393-202ENST00000452852 MYO18BQ8IUG5 2567 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 TRAV26-1A0A087WT03 109 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 IGHV5-51A0A0C4DH38 117 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 LOC285095A0A1B0GVY8 99 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 GOLGA8OA6NCC3 632 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 OR6C74A6NCV1 312 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 MGAT4DA6NG13 374 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 ZNF716A6NP11 495 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 E9PBE3 544 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 GOLGA8NF8WBI6 632 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 PDLIM1O00151 329 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 UGT1A9O60656 530 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 STX11O75558 287 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 ZNF189O75820 626 aaPredicted RBP3.55□□□□□ -1.84
LINC00393-202ENST00000452852 CIB2O75838 187 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 SRP72O76094 671 aaKnown RBP3.55□□□□□ -1.84
LINC00393-202ENST00000452852 HBQ1P09105 142 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 CCDC159P0C7I6 412 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 ZNF735P0CB33 412 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 GNB3P16520 340 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 UGT1A4P22310 534 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 F8A1P23610 371 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 CDKN2BP42772 138 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 MAGEA1P43355 309 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 BDKRB1P46663 353 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 POU3F4P49335 361 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 CEBPDP49716 269 aaPredicted RBP3.55□□□□□ -1.84
LINC00393-202ENST00000452852 SLC7A2P52569 658 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 PPP1CAP62136 330 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 BST1Q10588 318 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 KIAA0141Q14154 515 aaPredicted RBP3.55□□□□□ -1.84
LINC00393-202ENST00000452852 EIF2B1Q14232 305 aaKnown RBP3.55□□□□□ -1.84
LINC00393-202ENST00000452852 SLC1A5Q15758 541 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 CD226Q15762 336 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 GPRC6AQ5T6X5 926 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 FHL5Q5TD97 284 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 ADAM5Q6NVV9 412 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 APOOLQ6UXV4 268 aa3.55□□□□□ -1.84
LINC00393-202ENST00000452852 FRRS1Q6ZNA5 592 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms