RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ZNF346Q9UL40 294 aaKnown RBP23.22■■□□□ 1.31
USP42-204ENST00000451154 SLC22A23A1A5C7 686 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 MCIDASD6RGH6 385 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 PPIHO43447 177 aaKnown RBP23.21■■□□□ 1.31
USP42-204ENST00000451154 TRMUO75648 421 aaKnown RBP23.21■■□□□ 1.31
USP42-204ENST00000451154 OR7A10O76100 309 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 LCKP06239 509 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 SAGP10523 405 aaPredicted RBP23.21■■□□□ 1.31
USP42-204ENST00000451154 MAGEB1P43366 347 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 ZNF84P51523 738 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 SELENOVP59797 346 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 PIN1Q13526 163 aaPredicted RBP23.21■■□□□ 1.31
USP42-204ENST00000451154 RINLQ6ZS11 566 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 DPPA2Q7Z7J5 298 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 SYNPRQ8TBG9 265 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 ASB10Q8WXI3 467 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 SGTBQ96EQ0 304 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 SH3GL1Q99961 368 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 SIKE1Q9BRV8 207 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 TMEM120AQ9BXJ8 343 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 RACGAP1Q9H0H5 632 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 LPAR2Q9HBW0 351 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 INIPQ9NRY2 104 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 TREM2Q9NZC2 230 aa23.21■■□□□ 1.31
USP42-204ENST00000451154 FAM157AC9JC47 383 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 ZNF250P15622 560 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 ACADSP16219 412 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 OR1E2P47887 323 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 UCP2P55851 309 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 LAPTM4AQ15012 233 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 TBC1D28Q2M2D7 210 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 RFLNBQ8N5W9 214 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 RBM15BQ8NDT2 890 aaKnown RBP23.2■■□□□ 1.3
USP42-204ENST00000451154 NOXO1Q8NFA2 376 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 MOSPD2Q8NHP6 518 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 TMEM239Q8WW34 195 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 SEPHS2Q99611 448 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 HINT3Q9NQE9 182 aaKnown RBP23.2■■□□□ 1.3
USP42-204ENST00000451154 BAG5Q9UL15 447 aa23.2■■□□□ 1.3
USP42-204ENST00000451154 IQCMA0A1B0GVH7 501 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 FXYD1O00168 92 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 TCF21O43680 179 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 PTHP01270 115 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 VIMP08670 466 aaKnown RBP23.19■■□□□ 1.3
USP42-204ENST00000451154 CDAP32320 146 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 RBM34P42696 430 aaKnown RBP23.19■■□□□ 1.3
USP42-204ENST00000451154 KLF3P57682 345 aaPredicted RBP23.19■■□□□ 1.3
USP42-204ENST00000451154 CCL8P80075 99 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 MRPS11P82912 194 aaKnown RBP23.19■■□□□ 1.3
USP42-204ENST00000451154 PLP2Q04941 152 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 SF3A3Q12874 501 aaKnown RBP eCLIP23.19■■□□□ 1.3
USP42-204ENST00000451154 GLCCI1Q86VQ1 547 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 ICA1LQ8NDH6 482 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 OR1J2Q8NGS2 313 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 ZNF519Q8TB69 540 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 C11orf40Q8WZ69 217 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 ZNF583Q96ND8 569 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 C1orf198Q9H425 327 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 GPR160Q9UJ42 338 aa23.19■■□□□ 1.3
USP42-204ENST00000451154 C17orf100A8MU93 164 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 CDC14BO60729 498 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 RP2O75695 350 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 OR5F1O95221 314 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 SLC2A10O95528 541 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 MMP7P09237 267 aaPredicted RBP23.18■■□□□ 1.3
USP42-204ENST00000451154 RAD52P43351 418 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 MMEL1Q495T6 779 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 NRN1LQ496H8 165 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 TMEM154Q6P9G4 183 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 CPEB3Q8NE35 698 aaKnown RBP23.18■■□□□ 1.3
USP42-204ENST00000451154 OR8J3Q8NGG0 315 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 C10orf82Q8WW14 230 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 LRMDAQ9H2I8 198 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 HIF1ANQ9NWT6 349 aa23.18■■□□□ 1.3
USP42-204ENST00000451154 IGLV3-9A0A075B6K5 115 aa23.17■■□□□ 1.3
USP42-204ENST00000451154 PCMT1P22061 227 aa23.17■■□□□ 1.3
USP42-204ENST00000451154 DAP3P51398 398 aaKnown RBP23.17■■□□□ 1.3
USP42-204ENST00000451154 ARMC4Q5T2S8 1044 aa23.17■■□□□ 1.3
USP42-204ENST00000451154 ZNF416Q9BWM5 594 aa23.17■■□□□ 1.3
USP42-204ENST00000451154 VIPAS39Q9H9C1 493 aa23.17■■□□□ 1.3
USP42-204ENST00000451154 SIAEQ9HAT2 523 aa23.17■■□□□ 1.3
USP42-204ENST00000451154 CENPBD1B2RD01 187 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 MRASO14807 208 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 SNAP29O95721 258 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 GAAP10253 952 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 CCNOP22674 350 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 ZNF133P52736 654 aaPredicted RBP23.16■■□□□ 1.3
USP42-204ENST00000451154 LMO4P61968 165 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 HSF2Q03933 536 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 KLF10Q13118 480 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 PABPC1L2AQ5JQF8 200 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 C10orf128Q5T292 105 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 LIPHQ8WWY8 451 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 NSMAFQ92636 917 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 GTF3AQ92664 365 aaKnown RBP23.16■■□□□ 1.3
USP42-204ENST00000451154 HDAC2Q92769 488 aaKnown RBP23.16■■□□□ 1.3
USP42-204ENST00000451154 TMEM186Q96B77 213 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 BCL2L14Q9BZR8 327 aa23.16■■□□□ 1.3
USP42-204ENST00000451154 POLR2J2Q9GZM3 115 aaKnown RBP23.16■■□□□ 1.3
USP42-204ENST00000451154 POLR2J3Q9H1A7 115 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms