RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TMEM251Q8N6I4 163 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 ZFP62Q8NB50 900 aaPredicted RBP12.71□□□□□ -0.37
USP39-207ENST00000450066 FDCSPQ8NFU4 85 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 OTOSQ8NHW6 89 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 UCN2Q96RP3 112 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 SRXN1Q9BYN0 137 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 MRPL22Q9NWU5 206 aaKnown RBP12.71□□□□□ -0.37
USP39-207ENST00000450066 CCDC59Q9P031 241 aaKnown RBP12.71□□□□□ -0.37
USP39-207ENST00000450066 KLK13Q9UKR3 277 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 KLHDC2Q9Y2U9 406 aa12.71□□□□□ -0.37
USP39-207ENST00000450066 ZNF593O00488 134 aaPredicted RBP12.71□□□□□ -0.38
USP39-207ENST00000450066 OGG1O15527 345 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 KHDRBS3O75525 346 aaKnown RBP12.71□□□□□ -0.38
USP39-207ENST00000450066 TACSTD2P09758 323 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 STARP49675 285 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 TNFSF10P50591 281 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 CLRN1P58418 232 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 SIRPAP78324 504 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 PLGLB1Q02325 96 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 EGR3Q06889 387 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 SLC17A1Q14916 467 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 TRAM1Q15629 374 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 ZNF766Q5HY98 468 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 C22orf42Q6IC83 251 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 RPTNQ6XPR3 784 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 CREB3L2Q70SY1 520 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 TMEM178AQ8NBL3 297 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 NOXO1Q8NFA2 376 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 OR2V1Q8NHB1 315 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 FNDC8Q8TC99 324 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 HAVCR2Q8TDQ0 301 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 KCTD7Q96MP8 289 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 SF3B5Q9BWJ5 86 aaKnown RBP12.71□□□□□ -0.38
USP39-207ENST00000450066 ACOXLQ9NUZ1 547 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 QPCTLQ9NXS2 382 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 ST6GALNAC2Q9UJ37 374 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 GSTK1Q9Y2Q3 226 aa12.71□□□□□ -0.38
USP39-207ENST00000450066 IGHV3-15A0A0B4J1V0 119 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 ZNF726A6NNF4 738 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 PRR32B1ATL7 298 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 SULT1C4O75897 302 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 CELA3AP09093 270 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 GAAP10253 952 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 SDHBP21912 280 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 ENPP1P22413 925 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 MAGEA5P43359 124 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 SUCLG1P53597 346 aaKnown RBP12.7□□□□□ -0.38
USP39-207ENST00000450066 ADAM8P78325 824 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 ROR2Q01974 943 aaKnown RBP12.7□□□□□ -0.38
USP39-207ENST00000450066 CAMK2DQ13557 499 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 HIST3H3Q16695 136 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 DEFB109BQ30KR1 87 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 RPL22L1Q6P5R6 122 aaKnown RBP12.7□□□□□ -0.38
USP39-207ENST00000450066 ARL9Q6T311 187 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 UBQLNLQ8IYU4 475 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 SLC26A10Q8NG04 563 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 ASB17Q8WXJ9 295 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 FOXN4Q96NZ1 517 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 HDHD5Q9BXW7 423 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 TIGARQ9NQ88 270 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 KLHL9Q9P2J3 617 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
USP39-207ENST00000450066 IGKV1D-43A0A0B4J1Z2 117 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 METTL15A6NJ78 407 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 NPIPA2E9PIF3 369 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 NPIPA3F8WFD2 350 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 TLX3O43711 291 aaPredicted RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 HRGP04196 525 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 CD1AP06126 327 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 RPS19P39019 145 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 TGM4P49221 684 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 ENTPD1P49961 510 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 CLDN15P56746 228 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 MRPL28Q13084 256 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 CDK5R1Q15078 307 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 MOGQ16653 247 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 PDSS1Q5T2R2 415 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 SLC22A16Q86VW1 577 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 GLB1L2Q8IW92 636 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 ZNF454Q8N9F8 522 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 OR10D3Q8NH80 312 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 THEM6Q8WUY1 208 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 SMIM19Q96E16 107 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 PGLYRP3Q96LB9 341 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 CCDC86Q9H6F5 360 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 MRM2Q9UI43 246 aaKnown RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 KCNG2Q9UJ96 466 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 GRIP1Q9Y3R0 1128 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 KCNMB2Q9Y691 235 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 FRYQ5TBA9 3013 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 GABRPO00591 440 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 EFSO43281 561 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 CXCL13O43927 109 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 CEACAM4O75871 244 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 RGS9O75916 674 aaPredicted RBP12.69□□□□□ -0.38
USP39-207ENST00000450066 KRT8P05787 483 aa12.69□□□□□ -0.38
USP39-207ENST00000450066 PSKH1P11801 424 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms