RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LYRM7Q5U5X0 104 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CYHR1Q6ZMK1 362 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR9I1Q8NGQ6 314 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 C10orf82Q8WW14 230 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM239Q8WW34 195 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 IFT46Q9NQC8 304 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 MED16Q9Y2X0 877 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF175Q9Y473 711 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 AIPO00170 330 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 MT-ATP6P00846 226 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 NID1P14543 1247 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 S100A2P29034 98 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 IDH3AP50213 366 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ADAM8P78325 824 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOXF1Q12946 379 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZIC1Q15915 447 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 DDI2Q5TDH0 399 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 AADACL4Q5VUY2 407 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR2T33Q8NG76 320 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GMPPAQ96IJ6 420 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GPR137Q96N19 417 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLCO5A1Q9H2Y9 848 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 SAR1AQ9NR31 198 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 CCDC59Q9P031 241 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF646O15015 1829 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 FLNBO75369 2602 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 H0YJX3 145 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 FRS3O43559 492 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ETHE1O95571 254 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR8G3PP0DMU2 310 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 USF1P22415 310 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 GABRB3P28472 473 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 MAP2K4P45985 399 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ANKRD13BQ86YJ7 626 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 OPN3Q9H1Y3 402 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 HES4Q9HCC6 221 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 RIMS3Q9UJD0 308 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF443Q9Y2A4 671 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 RLFQ13129 1914 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 UGT2B11O75310 529 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 SEC14L2O76054 403 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM225BP0DP42 221 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 KLK2P20151 261 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC18B1Q6NT16 456 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 LEG1Q6P5S2 330 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 PLXDC2Q6UX71 529 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 TUBA1CQ9BQE3 449 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF552Q9H707 407 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 NTMQ9P121 344 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ADAM30Q9UKF2 790 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 PPIAL4AQ9Y536 164 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 DSCAMO60469 2012 aa5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 KIF26AQ9ULI4 1882 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-209ENST00000448940 ADAM20O43506 726 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC16A7O60669 478 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 FKBP6O75344 327 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TIAF1O95411 115 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 KDELR2P33947 212 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 S100A12P80511 92 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 DUSP5Q16690 384 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ABCA11PQ4W5N1 156 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 NRMQ8IXM6 262 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TGIF2Q9GZN2 237 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PAIP1Q9H074 479 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 MED17Q9NVC6 651 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF337Q9Y3M9 751 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR2M5A3KFT3 312 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 METTL21EPA6NDL7 271 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 NME2P1O60361 137 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 NME2P22392 152 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TSPAN5P62079 268 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAM71E1Q6IPT2 247 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PGAM4Q8N0Y7 254 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 JAGN1Q8N5M9 183 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 POM121Q96HA1 1249 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 LRR1Q96L50 414 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 C10orf90Q96M02 699 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRDM7Q9NQW5 492 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM100Q9NV29 134 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PTGDR2Q9Y5Y4 395 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ARPC2O15144 300 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 UBL3O95164 117 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 CNOT4O95628 575 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 SOD1P00441 154 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 COX6A1P12074 109 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 F2RP25116 425 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 MAPK3P27361 379 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 IL2RGP31785 369 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PDK3Q15120 406 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 GSG1Q2KHT4 349 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 SPATA46Q5T0L3 261 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF786Q8N393 782 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR4X2Q8NGF9 303 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 GSTO2Q9H4Y5 243 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 GFOD1Q9NXC2 390 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 MOKQ9UQ07 419 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 FREM1Q5H8C1 2179 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 RALGAPA2Q2PPJ7 1873 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 A0A087WV48 116 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 M0R129 80 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms