RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SYT4Q9H2B2 425 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 RHBGQ9H310 441 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC23A2Q9UGH3 650 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 WDR45Q9Y484 360 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF736B4DX44 427 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 OR10H2O60403 315 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 IFNA10P01566 189 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 FCGR3AP08637 254 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 HPGDP15428 266 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF28P17035 718 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC6A6P31641 620 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF136P52737 540 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 PKIAP61925 76 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 SSBP1Q04837 148 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 GAMTQ14353 236 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 SURF2Q15527 256 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 OR1Q1Q15612 314 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ACTBL2Q562R1 376 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 EIF5AL1Q6IS14 154 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF836Q6ZNA1 936 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TMPRSS11FQ6ZWK6 438 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TMEM150AQ86TG1 271 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ANGPTL5Q86XS5 388 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TRAM1L1Q8N609 369 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 CCDC54Q8NEL0 328 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 OR5AK2Q8NH90 309 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ADAMTS17Q8TE56 1095 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 NUP210Q8TEM1 1887 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 FGF13Q92913 245 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 GLYATL1Q969I3 302 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF764Q96H86 408 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF559Q9BR84 538 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 KCNK15Q9H427 330 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TRAV8-7A0A075B6U6 113 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 A0A1B0GVT2 93 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 IFITM10A6NMD0 228 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 OR52A4PA6NMU1 304 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 CDC40O60508 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 LRP3O75074 770 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 FBXO45P0C2W1 286 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZBTB25P24278 435 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 CTNNB1P35222 781 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 POLR2LP62875 67 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 DUSP2Q05923 314 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 LMAN2Q12907 356 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF627Q7L945 461 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 TAF8Q7Z7C8 310 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 OR8D1Q8WZ84 308 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 RRNAD1Q96FB5 475 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 CST11Q9H112 138 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 KCNG2Q9UJ96 466 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 CLEC4EQ9ULY5 219 aa8.57□□□□□ -1.04
SYNPO2-204ENST00000448416 A0A1W2PPE2 198 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 A0A1W2PS29 197 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 DCTN6O00399 190 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 EIF1AYO14602 144 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 OR1F1O43749 312 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 LAMP2P13473 410 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 HIST1H1CP16403 213 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 AK4P27144 223 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 EIF1AXP47813 144 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SULT1A1P50225 295 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 ADAM8P78325 824 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 FAM46CQ5VWP2 391 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 OR4C11Q6IEV9 310 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 PAPD4Q6PIY7 484 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 CD163Q86VB7 1156 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 TRAPPC5Q8IUR0 188 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 ZSCAN4Q8NAM6 433 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 MITD1Q8WV92 249 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 CNRIP1Q96F85 164 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 Q96M85 177 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 PRAP1Q96NZ9 151 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 C2orf88Q9BSF0 95 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC17A9Q9BYT1 436 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 MTHFD2LQ9H903 347 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 MRPS33Q9Y291 106 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 UTRNP46939 3433 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 TBC1D3KA0A087X1G2 549 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 P2RX6O15547 441 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 CD70P32970 193 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 PBX2P40425 430 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 PPICP45877 212 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 ID4P47928 161 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SCAND1P57086 179 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 GRB14Q14449 540 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 KCNAB1Q14722 419 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 OR13C8Q8NGS7 320 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 OR5K2Q8NHB8 316 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SEH1LQ96EE3 360 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC35A4Q96G79 324 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 TGM7Q96PF1 710 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SUCNR1Q9BXA5 334 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SPACA1Q9HBV2 294 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 ICAM5Q9UMF0 924 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 VSIG4Q9Y279 399 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 VWA8A3KMH1 1905 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 STATHP02808 62 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 CSNK2A2P19784 350 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms