RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	VRK1	Q99986	396 aa	Predicted RBP	11.41	□□□□□ -0.58
DDR1-238	ENST00000446312	OR51M1	Q9H341	326 aa		11.41	□□□□□ -0.58
DDR1-238	ENST00000446312	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.41	□□□□□ -0.58
DDR1-238	ENST00000446312	PNO1	Q9NRX1	252 aa	Known RBP	11.41	□□□□□ -0.58
DDR1-238	ENST00000446312	RXFP3	Q9NSD7	469 aa		11.41	□□□□□ -0.58
DDR1-238	ENST00000446312	KCNG2	Q9UJ96	466 aa		11.41	□□□□□ -0.58
DDR1-238	ENST00000446312		A0A1B0GTQ1	180 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	C13orf42	A0A1B0GVH6	325 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	TBX19	O60806	448 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	RP2	O75695	350 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	RBBP9	O75884	186 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	IFNA4	P05014	189 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	SPARC	P09486	303 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	RIDA	P52758	137 aa	Known RBP	11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	TRA2B	P62995	288 aa	Known RBP	11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	TMEM44	Q2T9K0	475 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	NUDT18	Q6ZVK8	323 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	TPRA1	Q86W33	373 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	CHST4	Q8NCG5	386 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	OR2M4	Q96R27	311 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	OR2A5	Q96R48	311 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	ZNF471	Q9BX82	626 aa	Predicted RBP	11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	LAMP5	Q9UJQ1	280 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	FOXJ3	Q9UPW0	622 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	PCNX3	Q9H6A9	2034 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	PHF3	Q92576	2039 aa	Known RBP	11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	DISC1	C4P0D8	188 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	LYPD3	O95274	346 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	VAMP1	P23763	118 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	RUNX3	Q13761	415 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	GFOD2	Q3B7J2	385 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	ACBD4	Q8NC06	268 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	TSNAX	Q99598	290 aa	Known RBP	11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	CMKLR1	Q99788	373 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	TRIM2	Q9C040	744 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	OR8D2	Q9GZM6	311 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	FRRS1L	Q9P0K9	344 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	KIF25	Q9UIL4	384 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	PHF11	Q9UIL8	331 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312	COLEC10	Q9Y6Z7	277 aa		11.4	□□□□□ -0.58
DDR1-238	ENST00000446312		B4DGG1	531 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	GPR37	O15354	613 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	CDC40	O60508	579 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	LMX1B	O60663	402 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ALOX12B	O75342	701 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	AKR7A3	O95154	331 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	SMIM6	P0DI80	62 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	LUM	P51884	338 aa	Predicted RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	PSG6	Q00889	435 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	SMAD4	Q13485	552 aa	Known RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ZNF765	Q7L2R6	523 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	FAM220A	Q7Z4H9	259 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ASB16	Q96NS5	453 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	TEX101	Q9BY14	249 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	EVA1A	Q9H8M9	152 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	TAS2R3	Q9NYW6	316 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ZNF281	Q9Y2X9	895 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312		A0A0B4J2E0	115 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312		A0A1B0GX12	115 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	GPR75	O95800	540 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	PI3	P19957	117 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	DPP4	P27487	766 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	GPX4	P36969	197 aa	Predicted RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	TSPAN7	P41732	249 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	SEC61A1	P61619	476 aa	Known RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	SKP1	P63208	163 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ARHGAP11A	Q6P4F7	1023 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	CDRT4	Q8N9R6	151 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	GPR119	Q8TDV5	335 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	RAB7B	Q96AH8	199 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	TGIF2	Q9GZN2	237 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ANKRD19P	Q9H560	264 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	NPFFR2	Q9Y5X5	522 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	TERT	O14746	1132 aa	Known RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	AGPAT2	O15120	278 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	BRINP1	O60477	761 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	WNT11	O96014	354 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	AMY2A	P04746	511 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	C4BPB	P20851	252 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	SLC2A5	P22732	501 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ACAA2	P42765	397 aa	Known RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	TAS2R43	P59537	309 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	PABPC1L2A	Q5JQF8	200 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	LINC00346	Q8IVM7	164 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	NPEPL1	Q8NDH3	523 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	MOAP1	Q96BY2	351 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	MEGF10	Q96KG7	1140 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	CMTM3	Q96MX0	182 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	REG4	Q9BYZ8	158 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	ABRACL	Q9P1F3	81 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	GHRL	Q9UBU3	117 aa		11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	NOP16	Q9Y3C1	178 aa	Known RBP	11.39	□□□□□ -0.59
DDR1-238	ENST00000446312	TGFBR3L	H3BV60	316 aa		11.38	□□□□□ -0.59
DDR1-238	ENST00000446312	SERPINA3	P01011	423 aa		11.38	□□□□□ -0.59
DDR1-238	ENST00000446312	CA3	P07451	260 aa		11.38	□□□□□ -0.59
DDR1-238	ENST00000446312	LINC00271	P0C7V0	271 aa		11.38	□□□□□ -0.59
DDR1-238	ENST00000446312	ST6GAL1	P15907	406 aa		11.38	□□□□□ -0.59

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