RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 MRM2Q9UI43 246 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 PLCL2Q9UPR0 1127 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 TMEM212A6NML5 194 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 DISC1C4P0D8 188 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 LINC01565O15544 149 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 SULT1B1O43704 296 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 TGM6O95932 706 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 CALCBP10092 127 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 B3GNTL1Q67FW5 361 aaPredicted RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 MUC20Q8N307 709 aaPredicted RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 OR4D10Q8NGI6 311 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 SLC25A38Q96DW6 304 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 TSNAXQ99598 290 aaKnown RBP10.8□□□□□ -0.68
MSH6-204ENST00000445503 LPAR4Q99677 370 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 ASF1BQ9NVP2 202 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 FBXO4Q9UKT5 387 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 EMC9Q9Y3B6 208 aa10.8□□□□□ -0.68
MSH6-204ENST00000445503 BRWD1Q9NSI6 2320 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 RLN2P04090 185 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 H2BFMP0C1H6 154 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 RRASP10301 218 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 SDHAP31040 664 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 RORAP35398 523 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 GUCA1AP43080 201 aaPredicted RBP10.79□□□□□ -0.68
MSH6-204ENST00000445503 BLKP51451 505 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 LUMP51884 338 aaPredicted RBP10.79□□□□□ -0.68
MSH6-204ENST00000445503 HLXQ14774 488 aaPredicted RBP10.79□□□□□ -0.68
MSH6-204ENST00000445503 C1QL3Q5VWW1 255 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 RHOUQ7L0Q8 258 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 MRGPRX1Q96LB2 322 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 NXF5Q9H1B4 397 aaKnown RBP10.79□□□□□ -0.68
MSH6-204ENST00000445503 FRRS1LQ9P0K9 344 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 OR5K4A6NMS3 321 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 MCRIP1C9JLW8 97 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 DCTN6O00399 190 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 NDUFB6O95139 128 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 SLC2A5P22732 501 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 DLSTP36957 453 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 EFNB2P52799 333 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 DMRTC1Q5HYR2 192 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 FAM199XQ6PEV8 388 aaPredicted RBP10.79□□□□□ -0.68
MSH6-204ENST00000445503 UNQ6126/PRO20091Q6UXV3 157 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 PRSS42Q7Z5A4 293 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 CCDC36Q8IYA8 594 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 TEX19Q8NA77 164 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 ZBTB8AQ96BR9 441 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 MRI1Q9BV20 369 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 PDE7BQ9NP56 450 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 TAS2R4Q9NYW5 299 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 MOKQ9UQ07 419 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 VDAC3Q9Y277 283 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 TMEM235A6NFC5 223 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 GGT3PA6NGU5 568 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 H3BML4 177 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 M6PRP20645 277 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 RAG2P55895 527 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 CARD17Q5XLA6 110 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 GPAT4Q86UL3 456 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 ATOH1Q92858 354 aaPredicted RBP10.79□□□□□ -0.68
MSH6-204ENST00000445503 CHST6Q9GZX3 395 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 HPF1Q9NWY4 346 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 SCML1Q9UN30 329 aa10.79□□□□□ -0.68
MSH6-204ENST00000445503 OR5K3A6NET4 321 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 SLC29A4Q7RTT9 530 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 SCARB1Q8WTV0 552 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 TOE1Q96GM8 510 aaKnown RBP10.78□□□□□ -0.68
MSH6-204ENST00000445503 NUDT22Q9BRQ3 303 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 OR11A1Q9GZK7 315 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 PILRAQ9UKJ1 303 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 ETV7Q9Y603 341 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 ANKRD20A5PA0PJZ0 165 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 J3QRE1 110 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 OIP5O43482 229 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 GLSO94925 669 aaPredicted RBP10.78□□□□□ -0.68
MSH6-204ENST00000445503 ZNF20P17024 532 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 HTR2CP28335 458 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 PLA2G7Q13093 441 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 CD226Q15762 336 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 NKAIN2Q5VXU1 208 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 TMEM65Q6PI78 240 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 CORO6Q6QEF8 472 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 NAXEQ8NCW5 288 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 FAM71CQ8NEG0 241 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 CPNE2Q96FN4 548 aaPredicted RBP10.78□□□□□ -0.68
MSH6-204ENST00000445503 S100A13Q99584 98 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 TIMP4Q99727 224 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 KIR2DS5A0A0G2JLQ3 304 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 A0A0G2JNG1 304 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 KIR2DS3K7RE56 304 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 DPP4P27487 766 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 CTHP32929 405 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 TAS2R19P59542 299 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 FZD5Q13467 585 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 KIR2DS5Q14953 304 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 TUSC1Q2TAM9 212 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 MDGA2Q7Z553 956 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 ZNF595Q8IYB9 648 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 OR4S1Q8NGB4 309 aa10.78□□□□□ -0.68
MSH6-204ENST00000445503 TTC9Q92623 222 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms